Gene Ndas_0539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0539 
Symbol 
ID9244380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand- 
Start bp662750 
End bp663661 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content75% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003678492 
Protein GI297559518 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCGGGGC GGTGCCCGCC CCCGAACCTG GAGGGTATGA CAGTCCGTGA GCACACCCTT 
CCCGACCGTT CCCTCCTCCT GCGCACGCTC GCGCCGATCG TCGGTCCGAT CTCCCCCGAC 
GCGGTGGTCT GCGACATCAC CGCCTCCTAC GTCTGGGGCG TGGACCTGCA CCCGGCGGGC 
ACCCGCGCCA CACGCACCCG CCCGCACGTG GCGGTCCCCC GGGGCGTACG CACCAGCGGC 
ATGCCGGTGG TCGCCCACCG GGAGCACGTG CCCGCCGCGG ACCGCGACGT GGTGGAGGGC 
GTGCGCGTCA CCAGCGCGGT GCGCGCGGCC GTCGACGTCG CCGCCCGCGC GCCCTCGGTC 
TTCATGGCCA CGGCCCGCCT CGACGCCTTC CTCTCCCGGG GGCTGGTCGC CGAGGGCGAC 
CTGCTCCGTG CCGCCCAGCG GGCCCGGTCC CAGCGGCAGC TGAGGCAGCT GCGCACCGCC 
CTGCGCTACT CCTCCGCGCT GAGCCAGTCG CCCGCCGAGT CGTGGACGCG TGTGCTGGTC 
CTGGAGGCGC TCCTGCCTCC TCCCGTCCCG CGGTGCCCGG TCCCCACCGA CGAGGGCGTG 
TTCCACGCCG ACCTCGGCTG GCCCGGCCAA CGGGTGGCGC TGGAGTACGA CAGCCTGGAG 
TTCCACTCCT CGACGGTGGC CGGGGCGAGC GACCGGGTCC GGTACGCGGC GATGCGGGCG 
CAGGACTGGG AGGTGGTCTC GGCGAGCGTG TACGACCTCC AGTTGCGTCC GGGACGGCTG 
CTGCGCCGCA TCCTGCACAT GCTCGTCCGC CAGGGCTGGT CGTGCCCTCC CGAGCACCTG 
GAGCTCATCC GCGACCGCGT GCGCGCCTAC GAGAGGGAGC CGCCCCAGCT CTTCACACCC 
CGGCGGCCCT AG
 
Protein sequence
MPGRCPPPNL EGMTVREHTL PDRSLLLRTL APIVGPISPD AVVCDITASY VWGVDLHPAG 
TRATRTRPHV AVPRGVRTSG MPVVAHREHV PAADRDVVEG VRVTSAVRAA VDVAARAPSV 
FMATARLDAF LSRGLVAEGD LLRAAQRARS QRQLRQLRTA LRYSSALSQS PAESWTRVLV 
LEALLPPPVP RCPVPTDEGV FHADLGWPGQ RVALEYDSLE FHSSTVAGAS DRVRYAAMRA 
QDWEVVSASV YDLQLRPGRL LRRILHMLVR QGWSCPPEHL ELIRDRVRAY EREPPQLFTP 
RRP