| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_0317 |
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| Symbol | |
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| ID | 9244152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014210 |
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| Strand | + |
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| Start bp | 392260 |
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| End bp | 393645 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_003678271 |
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| Protein GI | 297559297 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.241285 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGCT ACGCCCACCC CGCCGGTTCC CGCCACGCGG AGATCCTGCC GGAGGACAAC
CCGCCGCTGC CGCCCGAGGA CCTCAACGCC CTCGACCCGC GCGTGTGGCC CGCCACCGCG
CGCCGAACGG GCGGTGAGCT CACCGTCGGC GGCGTCGGCG TGCGCGAACT CGCCGCCACC
CACGGCACAC CGCTCTTCGT CATGGACGAG GAGGACTTCC GGGGCCGCGC CCGCGACTAC
CGCACCGCCT TCTCCGACGC CGACGTCTAC TACGCGGGCA AGGCGCTGCT GACCAAGGCC
GTCGCGCGCT GGGTCAACGA GGAGGGGCTC AAGCTCGACG TGTGCTCGGG CGGCGAACTC
ACCGTCGCCC TGGCCGCCGG GGTCCCCGCC GAGCGCATCG GCATGCACGG CAACAACAAG
TCCGCCGCCG AGCTGCGCCG CGCCGTCGAG GCCGGGGTGG GCCGCGTCAT CATCGACTCC
CTCGACGAGA TCGAGCGCCT CGGAGCGATC GCCGCCGAAC TCGGCGCCCG CCCCAAGGTC
CTCATCCGCG TCACCACCGG CGTGGAGGCG CACACCCACG AGTTCGTGGC CACCGCCCAC
GACGACCAGA AGTTCGGCTT CGCGATGAGC ACCGGCGCCG CCGCCGAGGC CGTCCGCCGC
GTCCTGGCCG CCCCGCACCT GGAACTCGTC GGCCTGCACT CGCACATCGG CTCGCAGATC
TTCGACACCT CCGGCTTCGA GGTCGCCGCC CGCCGCGTGA CCCGGTTCCT CACCGGCGTC
CACGAGGAGC TGGGCGTCAC CCTGGCCGAG CTCGACCTCG GCGGCGGCCT GGGCATCGCC
TACACCTCCG GCGACGACCC CCTGGACCCC AAGACCATCG CGGGGAGCCT GACCTCCATC
GTGCGCCGCG AGTGCGAGGA GGCCGGACTG CCGGTGCCCC GCATCGCGGT CGAGCCCGGC
CGCGCCATCG CGGGCCCGGC GGGGATCACC GTCTACGAGG TCGGTACCGT CAAGGACGTG
GAGGGCATCC GCACCTACGT CAGCGTCGAC GGCGGCATGA GCGACAACAT CCGCACCGCC
CTGTACGGCT CGGAGTACAC CAGCCAGCTC GTCTCCCGCG AGAGCGACGC CGAGCCCATG
CTGTCCCGCC TGGTCGGCAA GCACTGCGAG AGCGGCGACA TCATCGTCCA CGACCTCTAC
CTGCCCGCCG ACCTGCGCCC GGGCGACCTG GTGGCCGTCG CCGCCACCGG GGCCTACTGC
TACTCCATGG CGAGCAACTA CAACCACCTG CCCCGGCCGG CCATGGTCGC GGTCCGCGGC
GGGAGCTCCC GCGTCATCGT GCGCAGGGAG AACGAGGAGG ACCTCCTCCG CCTCGACGTC
GGCTGA
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| Protein sequence | MSRYAHPAGS RHAEILPEDN PPLPPEDLNA LDPRVWPATA RRTGGELTVG GVGVRELAAT
HGTPLFVMDE EDFRGRARDY RTAFSDADVY YAGKALLTKA VARWVNEEGL KLDVCSGGEL
TVALAAGVPA ERIGMHGNNK SAAELRRAVE AGVGRVIIDS LDEIERLGAI AAELGARPKV
LIRVTTGVEA HTHEFVATAH DDQKFGFAMS TGAAAEAVRR VLAAPHLELV GLHSHIGSQI
FDTSGFEVAA RRVTRFLTGV HEELGVTLAE LDLGGGLGIA YTSGDDPLDP KTIAGSLTSI
VRRECEEAGL PVPRIAVEPG RAIAGPAGIT VYEVGTVKDV EGIRTYVSVD GGMSDNIRTA
LYGSEYTSQL VSRESDAEPM LSRLVGKHCE SGDIIVHDLY LPADLRPGDL VAVAATGAYC
YSMASNYNHL PRPAMVAVRG GSSRVIVRRE NEEDLLRLDV G
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