Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_0303 |
Symbol | |
ID | 9244137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 378660 |
End bp | 379262 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003678258 |
Protein GI | 297559284 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00708396 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.627467 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGTCAA TACGTAACGT TGAAGACCGC ATCCTGGACG CGGCCCGCGC CTGCGTCGAG GCCTTCGGGG TGCGCCGCAC CACCCTGACC GACGTGGCGC GCCGCGCCGG GGTCAGCCGA CCCACCGTGT ACCGGCGCTG GCCCGACGCG ACCGCGCTCG TGGCCGACCT GCTCACCCGG GAGCTGCGGC GGATCCTCGC CGACCAGGGC GACGGCCCCG GCGGGCCCGC CGGGGAGGAC GTGCGCGCCC GGCTGGTCCG GCACGCGGCC GGGGTCGCCC GCGCGCTGCT CGCCCACCCG CTGTTCGTCC GGATCGTGGA CACCGAGCCC GAACTCCTGG CCACCTACAC CTTCCAGCGG CTGGGCACCA GCCACCGGGC GGCCCTCGAA CTGGTGGAAC CGGTCGTGGC CGAGGGCCAG CGCGACGGGT CGGTGCGCGC GGGCGACCCC GCGGTGCTGG CCCGCCTCGT ACTGGTCACG GTCCAGGGCA CGGTCACCTC CCGCCGCCTG TTCGCCGACG TCACCGACGA GTCCGGCCTC GTCGACGAGC TCGCCGCCCT CCTGGACGGC TACCTCCGCC CCCCGAACCA GGAGAGCCCA TGA
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Protein sequence | MASIRNVEDR ILDAARACVE AFGVRRTTLT DVARRAGVSR PTVYRRWPDA TALVADLLTR ELRRILADQG DGPGGPAGED VRARLVRHAA GVARALLAHP LFVRIVDTEP ELLATYTFQR LGTSHRAALE LVEPVVAEGQ RDGSVRAGDP AVLARLVLVT VQGTVTSRRL FADVTDESGL VDELAALLDG YLRPPNQESP
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