Gene Ndas_0303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0303 
Symbol 
ID9244137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp378660 
End bp379262 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content76% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003678258 
Protein GI297559284 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00708396 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.627467 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTCAA TACGTAACGT TGAAGACCGC ATCCTGGACG CGGCCCGCGC CTGCGTCGAG 
GCCTTCGGGG TGCGCCGCAC CACCCTGACC GACGTGGCGC GCCGCGCCGG GGTCAGCCGA
CCCACCGTGT ACCGGCGCTG GCCCGACGCG ACCGCGCTCG TGGCCGACCT GCTCACCCGG
GAGCTGCGGC GGATCCTCGC CGACCAGGGC GACGGCCCCG GCGGGCCCGC CGGGGAGGAC
GTGCGCGCCC GGCTGGTCCG GCACGCGGCC GGGGTCGCCC GCGCGCTGCT CGCCCACCCG
CTGTTCGTCC GGATCGTGGA CACCGAGCCC GAACTCCTGG CCACCTACAC CTTCCAGCGG
CTGGGCACCA GCCACCGGGC GGCCCTCGAA CTGGTGGAAC CGGTCGTGGC CGAGGGCCAG
CGCGACGGGT CGGTGCGCGC GGGCGACCCC GCGGTGCTGG CCCGCCTCGT ACTGGTCACG
GTCCAGGGCA CGGTCACCTC CCGCCGCCTG TTCGCCGACG TCACCGACGA GTCCGGCCTC
GTCGACGAGC TCGCCGCCCT CCTGGACGGC TACCTCCGCC CCCCGAACCA GGAGAGCCCA
TGA
 
Protein sequence
MASIRNVEDR ILDAARACVE AFGVRRTTLT DVARRAGVSR PTVYRRWPDA TALVADLLTR 
ELRRILADQG DGPGGPAGED VRARLVRHAA GVARALLAHP LFVRIVDTEP ELLATYTFQR
LGTSHRAALE LVEPVVAEGQ RDGSVRAGDP AVLARLVLVT VQGTVTSRRL FADVTDESGL
VDELAALLDG YLRPPNQESP