| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_0179 |
|---|
| Symbol | |
|---|
| ID | 9244010 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 229268 |
|---|
| End bp | 230068 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | 5-carboxymethyl-2-hydroxymuconateDelta- isomerase |
|---|
| Protein accession | YP_003678135 |
|---|
| Protein GI | 297559161 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.895975 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGCATCG CGCGGTTCGC GTCCGGTGAC GAGGTCGGGT TCGGCCTGGT AGAGAAGGAT
TCCGACACCG GGGAGGAGTT CGTCGCCCGG CTGAGCGGCC ACCCCCTCAT CGGCGACATC
CAGCTGACCG GCGAGCGGGC CAAGCTCTCC GACGTCCGGC TGCTGTCGCC GGTGCTGCCG
ACCAAGGTGG TCTGCATCGG CAAGAACTAC GCGGACCACG TCGCGGAGAT GAAGGACGTC
ACGGGGGAGT CCACCGACGA GCCCGTCGTC TTCCTCAAGC CCTCCACCGC CGTGACCGGG
CCCCGCGACC CGATCTTCCG CCCCGCCGTC TCCGAGCGGG TGGACTACGA GGGCGAGCTG
GCCATCGTCA TCTCCCGCCC CTGCCGCGAG GTGCCGCGCG AGCGCGCCAA GGACGTCATC
TTCGGCTACA CCGTCGCCAA CGACGTCACC GCCCGCGACC TGCAGAAGAA GGACAAGCAG
TGGACGCGGG CCAAGGGCTT CGACTCCTTC TGCCCCATCG GCCCCTGGAT CACCACCGGG
ATGAGCATCG AGGAGGCACA GGACCTGGCC GTCACCACCA CCGTGGACGG CCAGACGCGC
CAGGACGGGC GCACGTCGCA GTTCATCCAC GACATCCCGG ACATCATCGC CTACGTCACG
TCCTTCATGA CGCTGCTCCC CGGTGACGTG GTCCTCACCG GAACCCCCGC CGGGGTGGGT
CCGGTCGAGG TCGGCCAGGA GGTCGCGGTC ACGGTGGAGC GGTTGGGCAC GATCACCAAC
CGCGTGGTGG CCCGCGACTG A
|
|---|
| Protein sequence | MRIARFASGD EVGFGLVEKD SDTGEEFVAR LSGHPLIGDI QLTGERAKLS DVRLLSPVLP
TKVVCIGKNY ADHVAEMKDV TGESTDEPVV FLKPSTAVTG PRDPIFRPAV SERVDYEGEL
AIVISRPCRE VPRERAKDVI FGYTVANDVT ARDLQKKDKQ WTRAKGFDSF CPIGPWITTG
MSIEEAQDLA VTTTVDGQTR QDGRTSQFIH DIPDIIAYVT SFMTLLPGDV VLTGTPAGVG
PVEVGQEVAV TVERLGTITN RVVARD
|
|---|
| |