Gene Ndas_0111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0111 
Symbol 
ID9243942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp140304 
End bp141536 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content67% 
IMG OID 
Producttransposase, IS605 OrfB family 
Protein accessionYP_003678068 
Protein GI297559094 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.976081 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGGA AGAGCGTGAA GCGGGCGTTT CGGTACCGCT TCTACCCAAC CGATGCGCAG 
GCGGCTGAGC TGTCGCGCAC GTTCGGGTGC GTGCGCCTGG TCTACAACCG CGCCCTGGCC
GAACACACCG CCGCCTGGAA CACCGAACAG CGGCGGCTCT CATACACCGA CTCCTCCGCG
GCGCTGACCG TGTGGAAGAG GACCGAGGAG CTGGCCTTCC TTACCGAGGT CTCCTGCGTT
CCGCTCCAGC AGACGCTGCG CCACCTGCAC ACAGCTTTTC GGAACTTCTT CGACCGACGT
GCGAAGTACC CGCGGTTCAA GTCCAAGAAG AAGTCCCGGG CCTCAGCGGA GTACACCCGG
TCGGGGTTTC GCTACCGAGG CGGGCAGTTG ACCCTGGCCA AGATGACCGT CCCACTCGAT
GTGGTGTGGT CGCGGCCCCT GCCCGAAGGG GCACGGCCGT CCACGGTGAC GGTCTCGCGT
GACACGGCCG GGCGCTGGTT CGTCTCTCTG CTGTGCGAGG ACACCATCAC ATCGGCCCAG
GCCACTCGCG TCGTGGTCGG TGTCGATGCC GGAATCACCT CCGTGGTGAC GTTGTCGACG
GGGGAGAAGG TGGCCAACCC CCGCCACGAG CAACGCGACC GGGCGAAGCT GGCCCGGGCT
CAGCGGGCGC TGTCGCGTAA GGCCAAGGGC AGCACGAACC GGGACAAGGC GCGCCGAAAG
GTGGCGCGGG TGCACGCCCG CATCACCGAC CGTCGCAGGG ACTTCCTGCA CAAACTCTCT
ACTCGACTCG TCCGCGAGAA CCAAGCGGTC GTGATCGAGG ACCTGGCCGT GCGCAACCTG
GTCAAGAATC GCAGACTCGC CCGGGCAATC TCGGACGCGG CCTGGCGTGA GCTGCGCACG
ATGCTGGAGT ACAAGTGCGC CTGGCATGGG CGGGACCTGG TCGTGGTGGA CCGGTTCCTC
CCCTCCTCCA AGGCGTGCTC GACCCCCGGG TGCGGGTACC TCAATGCGTC GTTGCCGCTG
CGTGTAAGGG AGTGGACGTG CCCCGTTTGT GGGGTGGCCC ATGACCGGGA TGTGAACGCG
GCGCTCAATC TCGAAGCCGC CGGGCTGGCG GTGTTGGCCT GTGGAGCTGG TGTGAGACCT
CAACGGGAGT CCTTCCGGAC GGGGCGACCG GTAATGAAAC AGGAAGGCCA CGGGGCGACC
CGTGACGAGG CCCTGGCCTC GAGTCACCAG TAG
 
Protein sequence
MARKSVKRAF RYRFYPTDAQ AAELSRTFGC VRLVYNRALA EHTAAWNTEQ RRLSYTDSSA 
ALTVWKRTEE LAFLTEVSCV PLQQTLRHLH TAFRNFFDRR AKYPRFKSKK KSRASAEYTR
SGFRYRGGQL TLAKMTVPLD VVWSRPLPEG ARPSTVTVSR DTAGRWFVSL LCEDTITSAQ
ATRVVVGVDA GITSVVTLST GEKVANPRHE QRDRAKLARA QRALSRKAKG STNRDKARRK
VARVHARITD RRRDFLHKLS TRLVRENQAV VIEDLAVRNL VKNRRLARAI SDAAWRELRT
MLEYKCAWHG RDLVVVDRFL PSSKACSTPG CGYLNASLPL RVREWTCPVC GVAHDRDVNA
ALNLEAAGLA VLACGAGVRP QRESFRTGRP VMKQEGHGAT RDEALASSHQ