Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_0111 |
Symbol | |
ID | 9243942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 140304 |
End bp | 141536 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | transposase, IS605 OrfB family |
Protein accession | YP_003678068 |
Protein GI | 297559094 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.976081 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAGGA AGAGCGTGAA GCGGGCGTTT CGGTACCGCT TCTACCCAAC CGATGCGCAG GCGGCTGAGC TGTCGCGCAC GTTCGGGTGC GTGCGCCTGG TCTACAACCG CGCCCTGGCC GAACACACCG CCGCCTGGAA CACCGAACAG CGGCGGCTCT CATACACCGA CTCCTCCGCG GCGCTGACCG TGTGGAAGAG GACCGAGGAG CTGGCCTTCC TTACCGAGGT CTCCTGCGTT CCGCTCCAGC AGACGCTGCG CCACCTGCAC ACAGCTTTTC GGAACTTCTT CGACCGACGT GCGAAGTACC CGCGGTTCAA GTCCAAGAAG AAGTCCCGGG CCTCAGCGGA GTACACCCGG TCGGGGTTTC GCTACCGAGG CGGGCAGTTG ACCCTGGCCA AGATGACCGT CCCACTCGAT GTGGTGTGGT CGCGGCCCCT GCCCGAAGGG GCACGGCCGT CCACGGTGAC GGTCTCGCGT GACACGGCCG GGCGCTGGTT CGTCTCTCTG CTGTGCGAGG ACACCATCAC ATCGGCCCAG GCCACTCGCG TCGTGGTCGG TGTCGATGCC GGAATCACCT CCGTGGTGAC GTTGTCGACG GGGGAGAAGG TGGCCAACCC CCGCCACGAG CAACGCGACC GGGCGAAGCT GGCCCGGGCT CAGCGGGCGC TGTCGCGTAA GGCCAAGGGC AGCACGAACC GGGACAAGGC GCGCCGAAAG GTGGCGCGGG TGCACGCCCG CATCACCGAC CGTCGCAGGG ACTTCCTGCA CAAACTCTCT ACTCGACTCG TCCGCGAGAA CCAAGCGGTC GTGATCGAGG ACCTGGCCGT GCGCAACCTG GTCAAGAATC GCAGACTCGC CCGGGCAATC TCGGACGCGG CCTGGCGTGA GCTGCGCACG ATGCTGGAGT ACAAGTGCGC CTGGCATGGG CGGGACCTGG TCGTGGTGGA CCGGTTCCTC CCCTCCTCCA AGGCGTGCTC GACCCCCGGG TGCGGGTACC TCAATGCGTC GTTGCCGCTG CGTGTAAGGG AGTGGACGTG CCCCGTTTGT GGGGTGGCCC ATGACCGGGA TGTGAACGCG GCGCTCAATC TCGAAGCCGC CGGGCTGGCG GTGTTGGCCT GTGGAGCTGG TGTGAGACCT CAACGGGAGT CCTTCCGGAC GGGGCGACCG GTAATGAAAC AGGAAGGCCA CGGGGCGACC CGTGACGAGG CCCTGGCCTC GAGTCACCAG TAG
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Protein sequence | MARKSVKRAF RYRFYPTDAQ AAELSRTFGC VRLVYNRALA EHTAAWNTEQ RRLSYTDSSA ALTVWKRTEE LAFLTEVSCV PLQQTLRHLH TAFRNFFDRR AKYPRFKSKK KSRASAEYTR SGFRYRGGQL TLAKMTVPLD VVWSRPLPEG ARPSTVTVSR DTAGRWFVSL LCEDTITSAQ ATRVVVGVDA GITSVVTLST GEKVANPRHE QRDRAKLARA QRALSRKAKG STNRDKARRK VARVHARITD RRRDFLHKLS TRLVRENQAV VIEDLAVRNL VKNRRLARAI SDAAWRELRT MLEYKCAWHG RDLVVVDRFL PSSKACSTPG CGYLNASLPL RVREWTCPVC GVAHDRDVNA ALNLEAAGLA VLACGAGVRP QRESFRTGRP VMKQEGHGAT RDEALASSHQ
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