| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_0106 |
|---|
| Symbol | |
|---|
| ID | 9243937 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 134450 |
|---|
| End bp | 136474 |
|---|
| Gene Length | 2025 bp |
|---|
| Protein Length | 674 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | serine/threonine protein kinase |
|---|
| Protein accession | YP_003678063 |
|---|
| Protein GI | 297559089 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAGCA ACAGCGGCAG TGAACGCATC GTCGCGGACC GCTACGTCCT GCGCCGTGAA
CTCGGCCGCG GCGGTATGGG GGTGGTCTGG CAGGCCTTCG ACCCGACGCT GGACCGCGAC
GTCGCGATCA AGCAGGTGCT GCTTCCCGAC CACTTCACCG ACTCCGAGCG GGCGGACGCC
CACGGCCGGG TCCGGCGCGA GGCGCGCTCC GCCGCGCGGA TCAGCCACCC CACGGTGATC
ACCATCCACG ACGTCTTCGA GTACGACGGC AACCCGTGGG TGGTCATGGA GCTGGTCGAG
GGCGGGTCCC TCCAGGACCG GCTCGACGAG CGGGGCGCCC TGCCTCCGGA CGAGGTCGCG
GAGATCGCCG GGTCGCTGCT GCGCGCCGTG CGGGCCGCGA ACGCGGCCGG GGTCCTGCAC
CGCGACATCA AGCCGGGCAA CATCATGACG TCCCTGGACG GCCGGGTGAT CCTCACCGAC
TTCGGCATCG CGACGATGGA GGGCGGGCCG AGCATCACCC GCACCGGCGC GCTGATCGGC
TCCCCCGAGT ACATGCCGCC CGAGCGGCTG GCGGGCGGTC CGGCCGAGCA CCGGGGCGAC
CTGTGGAGCA TCGGCGTGAC CCTGTTCGCG GCGGTCGAGG GCACCTCCCC GTTCCGCCGC
GACAGCATCA CCGCGGCGAT CGCGGCGGTG ATGTCCGCGC CGCTGCCGCC GATGACGCGC
GCCGGGTGGC TGGAGCCGGT CATCTCCGGT CTGCTGGAGC GCGACCCGGA GCGCAGGCTG
AGCGCGGACG GGGCGCTGGC GCTGCTGCGC GAGCGCGGCG GGCCGAACGC GGGCGGCGAC
GACAGCGGCG GCTTCGGCGC GGCGGGCGCC GTGGGAGCCG CGGGGGCGGG CGCGTTCGCG
GACGGTACCC CGGCCTCCGG CAGCGGCCCG CACACGACAC CCGGCGTCAG CGGTCGGCAG
AGCCCCCACC ACACGCCGAG CGGTGGCCAC CCCGGCACGG GGCCGCGGGG CGGCTACCCC
CACACGCGGA CCCCGCTGCC TCAGGGCCCG ATGACGGGGC AGCGCCTGCC GCGGGGCGGA
CCGGCCGACC CGGTGACGCC CGCGTCGCCC TTCGCGCACG GGCACCGCAC GGTCCACCAG
CACCGGCCGC CCCACTCCGC GGGAGGCGGT CTCGGCGGCA CGGGCCGTGG CCCGGGTGGA
CCCGGGGGTC CGGGTGTCCC GCTCCACTCG GGCGGCCACG GCGGCGCGCG TCCGGGCTCG
GGCTCGGGGA ACACCAGGCT CCTCGTCGGC GTGGGCGCCG CGGTGGTGGT CCTGACGCTG
ATCGGCGGCG TTGCCGTGGT CGGTGCCACC CTGTTCGCCG GAGCCGAGGC CGAGGGCGGT
GCCTCCGAGG CGCTGTCGGC GTCCGAGAGC GCGCGGCCGC CGGCGGAGCC CTCCGCCTCC
GTCGGCGGGG ACGAGGGCGG TGCCGGCAGC GGCGGCGGTG AGGGCCGGGG CGAGGGCGGC
CAGACCGGCG GCGGGGACGA GAACGGGGAG CCGCCGTCCT ACGACGAGCT GGAGACCTTC
CGGTCGCAGT GGTTCCACGT GGACTACCCG GCCGGGTGGC AGGTGGACGA CAGTGAGATC
GAGAACACGC TGGCGGTGTT CGTCGCGCCG GGCAGCGACC ACCAGGTGTG GGTGACCGGC
TGGACCGAGC AGGAGTTCAC CGGGACGAGC GCCGAGTACC TGGAGGACAC CAACGGCGGG
ACGAAGGTCG AGGGTGACGT CACCACCGGC TACACGCAGC TGGAGCTGGA GGAGTTCGAC
GACGGCGACT TCGAGGAGGG CTGGGACGTC GCCCTGGTGG AGTCCGACCT CGTCAACGAG
ACCTGGGCGA GCCAGGAACG GCGCTTCTGG GCCTACGCGA TCAGCACAGA GCACGAGGGC
GACCGGGTGT TCTACCTGGT CAGCGTGAAC GTTCCGCGCG AGGACGCCGA CTACTACGAC
GACCTGCATG AGGACGTCAT GGAGACGTTC GACCCGCTGC TGTGA
|
|---|
| Protein sequence | MSSNSGSERI VADRYVLRRE LGRGGMGVVW QAFDPTLDRD VAIKQVLLPD HFTDSERADA
HGRVRREARS AARISHPTVI TIHDVFEYDG NPWVVMELVE GGSLQDRLDE RGALPPDEVA
EIAGSLLRAV RAANAAGVLH RDIKPGNIMT SLDGRVILTD FGIATMEGGP SITRTGALIG
SPEYMPPERL AGGPAEHRGD LWSIGVTLFA AVEGTSPFRR DSITAAIAAV MSAPLPPMTR
AGWLEPVISG LLERDPERRL SADGALALLR ERGGPNAGGD DSGGFGAAGA VGAAGAGAFA
DGTPASGSGP HTTPGVSGRQ SPHHTPSGGH PGTGPRGGYP HTRTPLPQGP MTGQRLPRGG
PADPVTPASP FAHGHRTVHQ HRPPHSAGGG LGGTGRGPGG PGGPGVPLHS GGHGGARPGS
GSGNTRLLVG VGAAVVVLTL IGGVAVVGAT LFAGAEAEGG ASEALSASES ARPPAEPSAS
VGGDEGGAGS GGGEGRGEGG QTGGGDENGE PPSYDELETF RSQWFHVDYP AGWQVDDSEI
ENTLAVFVAP GSDHQVWVTG WTEQEFTGTS AEYLEDTNGG TKVEGDVTTG YTQLELEEFD
DGDFEEGWDV ALVESDLVNE TWASQERRFW AYAISTEHEG DRVFYLVSVN VPREDADYYD
DLHEDVMETF DPLL
|
|---|
| |