Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_0044 |
Symbol | |
ID | 9243871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 55372 |
End bp | 56103 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003678002 |
Protein GI | 297559028 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.151121 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0260274 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGCA AGGTCGCGGT CGTGACGGGA GCGTCCCGGG GGATCGGGCG CGCTGTCGCC GAACGGTTGG GGGCGGATGG AGCGCGGGTG ATCGTCAACT ACCACTCGGA CGCGGTCGCG GCGAAGGACG CCGTGGCCGC CGTCGAGCGT GCGGGCGGAC GGGCCACCGC GGTGCGAGCC GATGTGCGCG ACGCGACGCA GCTGAGCTCT CTGTTCGAGG CGGCCGTTGC GGAGTACGGC GGGCTGGATG TCCTCGTCAG CAATACGGGG ATGGCGCGCC CCACGTCCCT GGCGGATGCC ACGGACGAGG ACTTGGATCT GCACTTCGCC ATCAACACCC GGCCCGTCTT CAGAGCCCTG AAGGAGGCCG TACTCCACAT GCGCCACGGT GGGCGGGTCG TCGTGATCTC CAGCGGTGCG ACCGTCGTGG CGCATCCCGG CGCGGGCCTC TACGCCGCGA GTAAAGCGGC AGCTGAGCAA CTGGCCCGGA CGGCGGCACA CGAGCTCGGA CCGCGCGGGA TCACGGTGAA CAGCGTGTTG CCCGGCGCTA CCCGCACCGA GGCCCTGCAA GCTCAGATGC CGGCTGACGT GGCCGCGTCC ATCCGTAGCC AGACGCCCCT CGGCCGCCTG GGCGAGCCGG CCGACATCGC ATCGGTGGTC GCGTTCCTGG TCTCGGACGA GGGCGCGTGG ATCAACGGCC AGACCATCCA CGCAAGCGGC GGCCTGTTCT GA
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Protein sequence | MNSKVAVVTG ASRGIGRAVA ERLGADGARV IVNYHSDAVA AKDAVAAVER AGGRATAVRA DVRDATQLSS LFEAAVAEYG GLDVLVSNTG MARPTSLADA TDEDLDLHFA INTRPVFRAL KEAVLHMRHG GRVVVISSGA TVVAHPGAGL YAASKAAAEQ LARTAAHELG PRGITVNSVL PGATRTEALQ AQMPADVAAS IRSQTPLGRL GEPADIASVV AFLVSDEGAW INGQTIHASG GLF
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