Gene Ndas_0026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0026 
Symbol 
ID9243853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand+ 
Start bp33461 
End bp34453 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content73% 
IMG OID 
ProductTransketolase central region 
Protein accessionYP_003677984 
Protein GI297559010 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.334429 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACCG ACCCCACCAA GCTCTCCATG GCCCAGGCCC TCAACCGGGC CCTGCGCGAC 
GCCATGGCCG AGGACCCGGC GGTGTACGTC TTCGGCGAGG ACGTCGGCCC CCTCGGCGGC 
GTCTTCCGCA TCACCGACGG CCTCACCGCC GAGTTCGGCG AGGACCGCTG CTTCGACACC 
CCGCTCGCCG AGTCCGGGAT CGTGGGCATG GCCGTCGGCA TGGCGATGAA CGGCATGCGC 
CCCGTGGTGG AGATGCAGTT CGACGCGTTC GCCTACCCGG CCTTCGAGCA GATCGTCAGC 
CACGTGGCCA AGACGCGCAA CCGCACCCGC GGCCGGGTCG GGCTGCCCAT GGTCATCCGC 
GTCCCCTACG CGGGCGGGAT CGGCGGCGTC GAGCACCACT GCGACTCCTC CGAGGCCTAC 
TACGCCCACA CGCCCGGCCT GACCGTGGTC ACCCCGTCCA CGCCCGCCGA CGCCTACTTC 
CTGCTGCGCG GGGCGATCGC CTCCGACGAC CCGGTCGTGT TCATGGAGCC CAAGAAGCTC 
TACTGGGGCA AGGACGAGGT CGACCTGTCC GCGCCCGAGC CGCCCATCGG TCGCGCCGTG 
GTGCGCCGCC CCGGCACCGA CGCCACCCTC ATCGCCTACG GCCCCTCGGT GCCCACCGCG 
CTGGAGGCGG CCGAGGCCGC AGCCCAGGAG GGCCGCAGCC TCCAGGTGGT GGACGTGCGC 
TCCCTCGTCC CCTTCGACGA CGCCACCGTG TGCGAGGCGG TCCGCTCCAC CGGGCGCGCC 
GTCGTGGTCG CCGAGGCCAG CGGGTACGCC AGCGTCGCCT CGGAGATCGT CGCGCGGGTG 
ACCGAGCGCT GCTTCCACTC CCTGGCCGCG CCGGTGCGCC GCGTCACCGG CTTCGACATC 
CCCTTCCCGC CGCCGAAGCT GGAGCGCTTC CAGCTCCCGG GCGTGGACCG GATCCTGGAC 
GCCGTCGACG ACCTTCAGTG GGAGGACCAG TGA
 
Protein sequence
MATDPTKLSM AQALNRALRD AMAEDPAVYV FGEDVGPLGG VFRITDGLTA EFGEDRCFDT 
PLAESGIVGM AVGMAMNGMR PVVEMQFDAF AYPAFEQIVS HVAKTRNRTR GRVGLPMVIR 
VPYAGGIGGV EHHCDSSEAY YAHTPGLTVV TPSTPADAYF LLRGAIASDD PVVFMEPKKL 
YWGKDEVDLS APEPPIGRAV VRRPGTDATL IAYGPSVPTA LEAAEAAAQE GRSLQVVDVR 
SLVPFDDATV CEAVRSTGRA VVVAEASGYA SVASEIVARV TERCFHSLAA PVRRVTGFDI 
PFPPPKLERF QLPGVDRILD AVDDLQWEDQ