Gene Ndas_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0003 
Symbol 
ID9243829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp4635 
End bp5534 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content72% 
IMG OID 
Product6-phosphogluconate dehydrogenase, decarboxylating 
Protein accessionYP_003677962 
Protein GI297558988 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.167829 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00572171 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGCTCG GAATGATCGG TCTCGGCAAG ATGGGCGGCA ACATGGCCGC CCGGCTGCGG 
GAGAAGGGCC ACGAGGTCGT CGGGTACGAC GTCGCCTCGC CGGAGCGCGA CGTCGACACC
CTGGCCGGAC TGGTCGAACG GCTGGCCGCC CCCCGGGTGG TCTGGGTGAT GGTCCCCGCG
GGCGACCCCA CGGCCGCGAC CATCGCCGAA CTGGGCGAGC TCCTGGACGA AGGAGACCTC
GTCATCGAGG GGGGCAACTC CCACTACGCG GACGACCGCG TCCGCGCCAA GGCGCTGGCG
GAGAAGGGCG TCGGCTACCT CGACGTCGGT GTCAGCGGCG GTGTCTGGGG CCGCCAGAAC
GGCTACGGCA TCATGGTCGG CGGCCCGGCC GAGGAGGTCG CGAAGGCCCG CCCGGTCTTC
GACTCCCTCG TGCCCGAGGA GGGCGTGGGC TTCGTCCACG CCGGAGCGGT CGGCGCAGGA
CACTTCGTCA AGATGGTCCA CAACGGCATC GAGTACGGCA TGATGCAGGC CTTCGGCGAG
GGCTACGAGC TCATGGTCGC CTCCGGCCTC GTGGACGACG TCCCCGGCAC GTTCGAGAGC
TGGCGCGAGG GCACCGTGGT GCGCTCCTGG CTGCTGGACC TGCTCTCGCG GGCCCTGGAG
GAGGACCCCG AGCTGTCGCG CCTGCGCGGC TACGCCGAGG ACTCCGGCGA GGGCCGCTGG
ACCGTCCAGG CCGCCGTGGA CCTCGCGGTC CCGGCCCCGG CGATCACCTC CTCCCTGTAC
GCGCGGTTCG CCTCCCGCCA GGACGACAGC CCGGCGATGA AGGTCGTGGC GGCCCTGCGC
AACCAGTTCG GCGGGCACGC CGTGCACCGC GCCGAGACCT CCGACGACAT CGACGTCTGA
 
Protein sequence
MQLGMIGLGK MGGNMAARLR EKGHEVVGYD VASPERDVDT LAGLVERLAA PRVVWVMVPA 
GDPTAATIAE LGELLDEGDL VIEGGNSHYA DDRVRAKALA EKGVGYLDVG VSGGVWGRQN
GYGIMVGGPA EEVAKARPVF DSLVPEEGVG FVHAGAVGAG HFVKMVHNGI EYGMMQAFGE
GYELMVASGL VDDVPGTFES WREGTVVRSW LLDLLSRALE EDPELSRLRG YAEDSGEGRW
TVQAAVDLAV PAPAITSSLY ARFASRQDDS PAMKVVAALR NQFGGHAVHR AETSDDIDV