Gene Tbis_3504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_3504 
Symbol 
ID9170036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp4089608 
End bp4091926 
Gene Length2319 bp 
Protein Length772 aa 
Translation table11 
GC content70% 
IMG OID 
Productphosphoketolase 
Protein accessionYP_003654085 
Protein GI296271453 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.705245 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGGAAA TCGCGAGCAT CGATGCCTAC TGGAGAGCGG CGAACTACCT GTCCGTCGGG 
CAGATCTACC TGCTCGACAA CCCGCTGCTC CGCGAGCCGC TGCGGCCCGA GCACATCAAG
CCCCGGCTGC TCGGCCACTG GGGCACCGTG CCGGGGATCA ACTTCTGCTT CGCCCACCTC
AACCGGATCA TCCGCCGGCG CGACCAGGAC ATGATCTACA TCTGCGGTCC CGGGCACGGC
GGGCCGGCCG TGGTGGCGCA CTCCTGGCTG GAGGGCACCT ACACGGAGCG GTACCCGCAC
ATCACCCAGG ACGCCAAGGG GATGCGGCTG CTGTTCCGGC AGTTCTCCTT CCCCGGCGGC
GTGCCCAGCC ACGCCGCGCC GGAGACGCCC GGCTCCATTC ACGAGGGCGG TGAGCTCGGC
TACTCCCTCG CCCACGCGTA CGGCGCCGCG TTCGACAACC CCGGGCTGGT GGTCGCCTGC
ATCATCGGCG ACGGGGAGGC GGAGACCGGG CCGCTCGCCG CGAGCTGGCA CTCGAACAAG
TTCCTCACCC CAGGCCGGGA CGGGGTGGTG CTGCCGATCC TGCACCTGAA CGGGTACAAG
ATCGCGAACC CGACGGTGCT GGCGCGCATC CCGGAGCCGG AGCTGGTCAA GCTCCTCGAG
GGGTACGGGT ACCGGGTGCA CATCGTCGCC GGGGACGACC CGGCGGAGCT GCACCCGCTG
ATGGCCCGGA CCCTGGACGA GGTCTTCGCG GAGATCGACG AGTACACCGC GGGGCGGGAG
CGCCGGCTCC CGATGATCGT GCTGCGCACG CCTAAGGGGT GGACCGGCCC GCGGGAGGTG
GACGGGGTGC CGGTGGAGGG CACCTGGCGA TCCCACCAGG TGCCGCTCGC CCAGGTCCGC
ACCAGCCCCG AGCACCTGCG CATGCTGGAG GAGTGGATGC GCTCCTACCG GCCGGAGGAG
CTGTTCGACG CCGAGGGACG GCCCACCCCG CTGGTCCTCG GCGAGGTGCC CGAGGGCGAG
CGGCGGATGA GCGCGAACCC GCACGCCAAC GGCGGCGAGC TGCTCGTGCC GCTGGTGCTG
CCCGACTTCC GCGACTACGC GGTGCCGGTG AAGGAGCCCG CGGTGACCTG CAGCGAGCCC
ACCCGGGTGC TGGGGAGCTA CCTGCGGGAC GTGATCGCGG CCAACCCGCG CAACTTCCGG
CTGATGGGCC CGGACGAGAC CGCGTCCAAC CGGCTCTCCG CCGTGTTCGA GGCGACCGAC
AAGGCCTGGG ACGCCGCCGT GCTCGGCACC GACGAGCACC TGTCCCGGGA GGGCCGGGTG
ATGGAGGTGC TGAGCGAGCA CCTCTGCCAG GGCTGGCTCG AGGGCTACCT GCTCACCGGG
CGGCACGGCC TGTTCAACTG CTACGAGGCG TTCATCCACA TCGTGGACGC CATGTTCAAC
CAGCACGCCA AGTGGCTGGA GTCGGCGAAG AAGATCCCCT GGCGGCGGCC GGTGGCGTCG
CTCAACTACC TGCTCACCTC GCACGTGTGG CGGCAGGACC ACAACGGGTT CAGCCACCAG
GACCCGGGCT TCCTCGACGT GGTGGTGAAC AAGAAGGCCG ACGTGGTCAG GGTCTACCTG
CCGCCGGACA CCAACACCCT GCTCTCGGTC GCTGACCACT GCCTGCGCTC GCGGGACTAC
GTCAACGTGA TCGTGGTGGG CAAGCAGCCC GTGCTCGACC TGATGAGCAT GGACGAGGCG
ATCGCCCACT GCACCCGGGG CGCCGGCATC CTGCGCTGGG CCTCCACCGA TGAGGGGGCC
GAGCCGGACG TGGTGCTCGC GTGCGCCGGG GACGTCCCGA CGATGGAGAC GCTCGCCGCC
GCCGCGCTGC TCCGCGCCCA CCTGCCCGAG CTGCGGGTCC GGGTGGTGAA CGTGGTCGAC
CTGATGTGCC TGCAGCCGCC CTCGGAGCAC CCGCACGGCC TGTCCGACCA CGAGTTCGAC
GCCCTGTTCA CCACGGACAA GCCGATCATC TTCAACTTCC ACGGCTACCC GTGGCTCATC
CACCGGCTCA CCTACCGGCG GAACGGCCAC GACAACCTGC ACGTGCGGGG CTACAAGGAG
GAGGGCACCA CGACCACGCC CTTCGACATG GCGATGATGA ACGACATCGA CCGGTTCCAC
CTGGTCATGG ACGTGATCGA CCGCGTGCCC GGCCTGCGCA CCACCGCGAG CCACCTCCGG
CAGGCGATGG TCGACGCCCG GCTGCGGGCC CGGGCGTACA CCCGCGATCA CGGCGAGGAC
CCGCCGGAGA TCCGCGATTG GACCTGGCCC TACGACTGA
 
Protein sequence
MEEIASIDAY WRAANYLSVG QIYLLDNPLL REPLRPEHIK PRLLGHWGTV PGINFCFAHL 
NRIIRRRDQD MIYICGPGHG GPAVVAHSWL EGTYTERYPH ITQDAKGMRL LFRQFSFPGG
VPSHAAPETP GSIHEGGELG YSLAHAYGAA FDNPGLVVAC IIGDGEAETG PLAASWHSNK
FLTPGRDGVV LPILHLNGYK IANPTVLARI PEPELVKLLE GYGYRVHIVA GDDPAELHPL
MARTLDEVFA EIDEYTAGRE RRLPMIVLRT PKGWTGPREV DGVPVEGTWR SHQVPLAQVR
TSPEHLRMLE EWMRSYRPEE LFDAEGRPTP LVLGEVPEGE RRMSANPHAN GGELLVPLVL
PDFRDYAVPV KEPAVTCSEP TRVLGSYLRD VIAANPRNFR LMGPDETASN RLSAVFEATD
KAWDAAVLGT DEHLSREGRV MEVLSEHLCQ GWLEGYLLTG RHGLFNCYEA FIHIVDAMFN
QHAKWLESAK KIPWRRPVAS LNYLLTSHVW RQDHNGFSHQ DPGFLDVVVN KKADVVRVYL
PPDTNTLLSV ADHCLRSRDY VNVIVVGKQP VLDLMSMDEA IAHCTRGAGI LRWASTDEGA
EPDVVLACAG DVPTMETLAA AALLRAHLPE LRVRVVNVVD LMCLQPPSEH PHGLSDHEFD
ALFTTDKPII FNFHGYPWLI HRLTYRRNGH DNLHVRGYKE EGTTTTPFDM AMMNDIDRFH
LVMDVIDRVP GLRTTASHLR QAMVDARLRA RAYTRDHGED PPEIRDWTWP YD