Gene Tbis_3135 details

Gene Information

• Locus tag: Tbis_3135
• ID: 9169655
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobispora bispora DSM 43833
• Kingdom: Bacteria
• Replicon accession: NC_014165
• Strand: -
• Start bp: 3679919
• End bp: 3683413
• Gene Length: 3495 bp
• Protein Length: 1164 aa
• Translation table: 11
• GC content: 72%
• Product: transcription-repair coupling factor
• Protein accession: YP_003653722
• Protein GI: 296271090

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.223116
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 34
• Fosmid unclonability p-value: 0.109749
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCTCTTT CCGGACTTCT TGACCTGGTT TCCGCTGAAC CGAGGCTGGC CGCGACGCTC 
GAGGAGGCGA AAGAGTCCTC GCACCCCGGT GCCGAGCTGA TCGCCCCGGC CGCGCTGCGG 
CCGTTCGTCG TCGCCGCGCT CGCCCGGATC CGACCCGTGC TCGCGGTGAC GGCGACCGAG 
CGGGAGGCCG AGGACCTCGC CGCCGCGCTG GACAGCCTCA TGGACGAGAG CGGCGTCGCC 
GTCTTCCCGG CCTGGGAGAC GCTCCCGCAC GAGCGGCTCT CGCCGCGGAG CGACACGGTC 
GGCCGCCGGC TCGCCGTGCT GCGGCGGCTC GCCCACCCGG TCGAGGGCGA CCCCGCCGCC 
GGTCCGCTTC GGGTGGTCGT GGCCCCGGTC CGGGCCGTGC TGCAGCCGAT CGTGGCCGGG 
CTCGGCGATC TGGAGCCGGT ACGGCTCCGC CCCGGCGACG AGGCGGACCT CGACGAGGTG 
GTGGCCCGCC TGGTGGACAA CGGCTACCAC CGGGTGGACA TGGTGGAGCG GCGGGGCGAG 
GTCGCGGTGC GCGGCGGGCT GGTCGACGTG TTCCCGCCCA CCGAGGAGCA CCCGCTCCGG 
ATGGAGTTCT GGGGTGACAC GGTCGAGGAG ATCCGCTGGT TCAAGGTGGC CGACCAGCGC 
TCGCTCGAGG TCGCCCCGGA GGGGCTGTTC GCCCCGCCCT GCCGCGAGCT GCCGCTCACC 
GAGGAGGTAC GGCGGCGCGC CCGGGAGCTG GCGGGGGAGT ACCCGGCGCT GAAGGACGTG 
CTCGACCAGA TCGCCGACGG CGTGCCGGTG GAGGGGATGG AGACGTTCGC GCCGGTGCTG 
GCCGGCGAGA TGAACCTGCT CCTCGACCAC ATGCCGGTCC GGTCGGCGGT GGTGGTCTGC 
GACCCGGAGC GGATCCGCGG CCGGGCCCAG GAGCTGGTGC GGACCGCGGA GGAGTTCAAG 
CAGGCGTCCT GGATCACCGC GGCCCTCGGG GGCGAGGCGC CGATCGACCT CGACGCGGTG 
GCGTTCCGCA CCCTGGAGGA GGTGCACGCC CACGCCCGTG AGCTGGGCCG GCCGTGGTGG 
AGCGTGGCGC CGTTCGGGGA TGGCGTGGAG CTCGACGTCC AGGGCGTCGA CCAGTACCGG 
GGGGACACCG AGCGGGCGCT CGCCGACATC AAGGGCTGGC TCGAGGCGGG CAAGACCGTG 
GTGCTGCTGA GCGAGGGCCA CGGCCCGGCC GAGCGCCTGG TGGAGCTGCT GCGCGGGGTG 
GACGTGCCCG CGCGGCTGGT GCCGGAGGTC GCGGACGGGC CGGTCCGCGA CGTGGTCCAG 
GTGACCACGG GGCGGATCGC CCACGGCTTC GTCACCCCGG ACGTGGCCGT GCTCACCCAC 
CTGGACGTGG CCGGGCAGAA GGCGTCGACC AAGGACATGC GGCGGCTGCC GTCCCGGCGG 
CGGAACATGG TCGACCCGCT CCAGCTCAAG CCGGGCGACT ACGTGGTGCA CGAGCAGCAC 
GGCGTGGGCC GGTACGTGGA GATGGTGCAG CGCACGGTCC AGGGCGCCAC CCGCGAGTAC 
CTGGTGATCG AGTACGCCAA GGGCGACCGG CTCTACGTGC CCACCGACCA GCTCGACGAG 
GTCACGCGGT ACGTCGGCGG GGAGACGCCC ACGCTCAACC GGATGGGCGG CTCGGACTGG 
CAGAAGACCA AGAGCCGGGC GCGGAAGGCG GTCCGGGAGA TCGCGGCCGA GCTGATCCGG 
CTGTACTCGG CCCGCATGGC CTCGCCCGGG TTCGCGTTCT CCCCGGACAC CCCGTGGCAG 
CGGGAGATGG AGGACGCCTT CCCCTACGTC GAGACCAAGG ACCAGCTCGA GGCGATCGAG 
GAGGTCAAGC GGGACATGGA GCGGCCGGTC CCGATGGACC GGCTGATCTG CGGCGACGTG 
GGGTACGGCA AGACCGAGAT CGCGGTCCGG GCGGCGTTCA AGGCGGTGCA GGACGGCAAG 
CAGGTGGCGG TCCTGGTGCC GACCACCCTC CTGGTGCACC AGCACCTGTC CACGTTCGGC 
GAGCGGTTCG CCGGGTTCCC GGTGACGGTG CGGCCGCTGT CCCGGTTCCA GTCCGACGCG 
GAGATCAGGG AGACCCTCGA CGGGCTCCGG GAGGGCACCG TCGATGTGGT GATCGGCACC 
CACCGGCTGC TCTCTCCGGA CGTGAAGTTC AAGGACCTCG GCCTGCTCAT CGTCGACGAG 
GAGCAGCGGT TCGGCGTCGA GCACAAAGAG GCGATGAAGC GGATGCGGAC CGAGGTGGAC 
GTGCTCGCGA TGTCGGCCAC CCCGATCCCG CGGACCCTGG AGATGGGGCT CACCGGCATC 
CGGGAGATGT CCACGATCCT CACGCCGCCC GAGGAGCGGC ACCCGGTGCT CACGTTCGTC 
GGGCCGTACG ACGAGAAGCA GATCGCGGCC GCGATCCGGC GGGAGCTGAT GCGGGACGGG 
CAGACGTTCT TCGTCCACAA CCGGGTGCGG AGCATCGACC GGGTCGCGGC CCGGCTCGCC 
GAGCTGGTCC CCGAGGCGCG GATCGCGGTC GCCCACGGGC AGATGAACGA GGCCCAGCTC 
GAGAAGATCA TGGTGGACTT CTGGGAGCGG GCTTACGACG TGCTCGTCTG CACCACGATC 
GTGGAGTCCG GCCTCGACGT GCCGAACGCG AACACGCTGA TCGTGGACCG GGCGGACAGC 
TACGGCCTGG CCCAGCTCCA CCAGCTCCGC GGCCGGGTCG GCCGGGGCCG GGAGCGCGGC 
TACGCGTACT TCCTCTACCC GCCGGACGTC CCGCTCACCG AGACCGCGCA CGAGCGGCTC 
GCCACCATCG CCCAGCACAC CGAGATGGGC GCCGGCATGT ACGTGGCCAT GAAGGACCTG 
GAGATCCGCG GGGCCGGCAA CATCCTGGGG ACCGAGCAGT CCGGCCACAT CGCCGGGGTG 
GGGTTCGACC TGTACGTCCG GATGATGGCG GAGGCGGTCG AGGAGCAGAA GTCGAAGCTC 
TCCGGGCAGG CCCCGAAGGA GCGGCCGGAG GTCAAGGTCG AGCTGCCGAT CAACGCCCAT 
GTGCCGCACG AGTACGTGAC CTCGGAGCGG CTCCGGCTCG AGGCGTACAA GCGGATCGCG 
GCGATCGAGT CGGAGGAGGA CATCGCCGCG GTGCGCGAGG AGCTCACCGA CCGGTACGGC 
CGGCCGCCGC AGGAGGTGGA GAACCTGCTC GAGGTCGCCC GCTTCCGGAT CAAGGCGCGG 
GAGGCCGGGC TCACCGACGT GACGCTGCAG GGCCGGCAGA TCCGGTTCTC GCCGGTGACC 
CTGAAAGATT CACAGCGGGT CCGGCTGCAG CGGCTCTACC CGAAGGCGAT CTACAAGCAG 
GCGACCGAGA TCCTGCTGGT CCCGGTCCCG ATGACCAAAC CGGTGGGGGG CCGGCCGCTG 
CGCGACCTCG ACCTGCTGAA ATGGTGTGCC GACCTGGTCG AGGCACTATT CCTGGAACCG 
GCACGAGTAC AGTGA 

 

Protein sequence

MSLSGLLDLV SAEPRLAATL EEAKESSHPG AELIAPAALR PFVVAALARI RPVLAVTATE 
REAEDLAAAL DSLMDESGVA VFPAWETLPH ERLSPRSDTV GRRLAVLRRL AHPVEGDPAA 
GPLRVVVAPV RAVLQPIVAG LGDLEPVRLR PGDEADLDEV VARLVDNGYH RVDMVERRGE 
VAVRGGLVDV FPPTEEHPLR MEFWGDTVEE IRWFKVADQR SLEVAPEGLF APPCRELPLT 
EEVRRRAREL AGEYPALKDV LDQIADGVPV EGMETFAPVL AGEMNLLLDH MPVRSAVVVC 
DPERIRGRAQ ELVRTAEEFK QASWITAALG GEAPIDLDAV AFRTLEEVHA HARELGRPWW 
SVAPFGDGVE LDVQGVDQYR GDTERALADI KGWLEAGKTV VLLSEGHGPA ERLVELLRGV 
DVPARLVPEV ADGPVRDVVQ VTTGRIAHGF VTPDVAVLTH LDVAGQKAST KDMRRLPSRR 
RNMVDPLQLK PGDYVVHEQH GVGRYVEMVQ RTVQGATREY LVIEYAKGDR LYVPTDQLDE 
VTRYVGGETP TLNRMGGSDW QKTKSRARKA VREIAAELIR LYSARMASPG FAFSPDTPWQ 
REMEDAFPYV ETKDQLEAIE EVKRDMERPV PMDRLICGDV GYGKTEIAVR AAFKAVQDGK 
QVAVLVPTTL LVHQHLSTFG ERFAGFPVTV RPLSRFQSDA EIRETLDGLR EGTVDVVIGT 
HRLLSPDVKF KDLGLLIVDE EQRFGVEHKE AMKRMRTEVD VLAMSATPIP RTLEMGLTGI 
REMSTILTPP EERHPVLTFV GPYDEKQIAA AIRRELMRDG QTFFVHNRVR SIDRVAARLA 
ELVPEARIAV AHGQMNEAQL EKIMVDFWER AYDVLVCTTI VESGLDVPNA NTLIVDRADS 
YGLAQLHQLR GRVGRGRERG YAYFLYPPDV PLTETAHERL ATIAQHTEMG AGMYVAMKDL 
EIRGAGNILG TEQSGHIAGV GFDLYVRMMA EAVEEQKSKL SGQAPKERPE VKVELPINAH 
VPHEYVTSER LRLEAYKRIA AIESEEDIAA VREELTDRYG RPPQEVENLL EVARFRIKAR 
EAGLTDVTLQ GRQIRFSPVT LKDSQRVRLQ RLYPKAIYKQ ATEILLVPVP MTKPVGGRPL 
RDLDLLKWCA DLVEALFLEP ARVQ