Gene Tbis_2461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_2461 
Symbol 
ID9168967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp2875870 
End bp2878842 
Gene Length2973 bp 
Protein Length990 aa 
Translation table11 
GC content73% 
IMG OID 
Productribonuclease, Rne/Rng family 
Protein accessionYP_003653057 
Protein GI296270425 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.384924 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.18702 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGAAA ACGAGCCCTT CGACAGGGCT GTGAGCTCTG ATCGTGACGC GATAACAGAC 
GCCACAACAG AAGACCGTGA CAACGGCTCG GGGGCGAGCG AGGCTCCGTC CGAGCCGGAG
GCGCGTGCGG CGAGGCCGCG CCGGCGGGCC GCGAGCCGAC CGGCCGGGCC GCCGCCCGAG
CCCGAGGACG TGCCGCCGCC GGTACAGGTG ACCACGGTGC CCGCCGGGGC GGACCACAAG
GTGAGTGAGC CGGTCGCGCG CCCGATCAAG GGCGCCCGGC GCAGCGCTGG AGCGGTCGAG
GACGAGGAGA GCGCACCGGC CGCCGAGCGG CCCGCCACCG AGCCGGCGGA GAAGACCGCC
GGCGGGGCGG CGGAGCAGAG CGCAAGACCC GAGCCCGTGG CCGATGAGGC GGCCCGGGCG
GCATCGGCCG AGCCGGAGGC CGGGACCGCG GAGCCGGAGG ACGACCGCGC GGAGTCCGCG
CAGCCGGCCC TCGCGGGTGA GCGGACCGAA TCGGGGGCCT CGCCGACCAG GCGGCGCCGG
ATCAGAAGGA GAACCCGGTC CGGCCAGGCC GTGCCGAGCG TGATGACCGC CGCCGTGGAG
GAGGTCGCGA CCGCCCTGCG GATCGGCCCG GCGGAGGACG CCCACGGTGA GGAGCCTGCC
GAGCCCGGGG CCGCGGCCAC CGAGGCCCGG GAGGGCGAGC CGGCCGCGGA GCGGTCCACC
GGTGTGGTCC GGCCCGACGT GGTGACCGAT CCGTTCGGCT TCAACAACTC CGCGGAGCGC
CCGGCGGTCC CCAAGGTGAC GTTCCAGTCA CCGGCGTCGC TGTTCCAGCC GATCTTCCAG
CCGCCCGACC CGGCGGCCGC CATACCGCTC TCGCGCCGGG CCGCGTCGGA CGAGCCGGAG
GAGGCCGAGG ACCACGCCGA GGCCGAGCGC GCGGAGGAGG CAGGCGAGGA GACCGCCACG
CCGCGCCGCC GGCGCCGCCG CCGTGGCGGC CGGGGCCGGT CCCGGGCCAA GGAGGCGGCC
GAGACCGAGG CCCAGGAGCC GGAGCCCGAG CCGGAGAAGA CATCGGCCGA GGCCGCCGGA
CGCTCCGGGG CGGCCGCCGA GGAGGAGCGG CCGGCGGAGG AGGAGCCCGC CGCCGAGCAG
ACCTCCGTTG AGCAGACCTC CACTGAGCAG GCCGAGGCCG AGGAGCAGCC GGCCGAGACC
ACCTCTGAGA CCGCCACCGA GCAGCAGGCC GCGCAAGCGG AGCAGGCCAC CGGGACGTCG
CGCCGCCGCC GTCGCCGCCG CCGCCGGTCC ACCGAGGAGA TCGAGCCGAC GCCCGACGAT
CCGCCGAACA CGGTGATCCG CATCCGGGCG CCCCGTACGG CCAAGCCGAG CTCGAGCCTG
CTCGACGAGG TGCAGGGCGT CCGCGGGTCC ACCCGGCTCG AGGCGAAGAA GCAGCGCCGC
CGGGAGGGCC GGGAGCTCGG CCGCCGGCGC CCGCTGATCC TCACCGAGTC GGAGTTCCTC
GCCCGGCGGG AGTCCGTCGA GCGCATCATG ATCATCCGCC GCAATGCCGG CCGGACCCAG
GTCGCGGTGC TCGAGGACGG CGTGCTCGTC GAGCACTACG TGGACCGTGA GTCGAACCGG
TCATACGTCG GCAACGTGTA CCTGGGCAAG GTGCAGAACG TGCTCCCCTC GATGGAGGCG
GCCTTCGTCG ACATCGGCAA GGGGCGCAAC GCGGTGCTGT ACGCCGGCGA GGTGAACTTC
GACTCCGCGG GCCTGGAGGG CCAGCCCAAG CGGATCGAGG CGGCGCTGAA GTCCGGCCAG
TCGGTGCTGG TCCAGGTCAC CAAGGACCCC ATCGGCCACA AGGGGGCCAG GCTCACGTCG
CAGATCACCC TGCCCGGCCG GTACCTCGTC TACGTGCCGG ACGGCTCGAT GACCGGGATC
TCCCGGAAGC TCCCGGACAA GGAGCGGGCC AGGCTCAAGC AGATCCTCCG CAAGGTGATG
CCGGAGAACG CCGGGGTGAT CGTCCGTACC GCGGCCGAGG GCGCCACCGA GGAGGAGCTC
AGCCGCGACG TGGCCCGGCT CGCCGCGCAA TGGGAGAGCA TCCAGCGCAA GGCGAAGACG
GCCAGCCCGC CGGAGCTGCT GCTCGGCGAG CCCGACCTGA TGATCCGGGT GGTCCGGGAC
ATCTTCAACG AGGACTTCAG CACGCTGATC GTCCAGGGCG ACGAGGCGTG GAACACGGTC
GAGGAGTACG TCCGCTACGT CGCGCCGCAC CTGCTCGATC GGCTGAAGAA GTGGGACGAG
GAGACCGACG TCTTCACCGC CTACCGGATC GACGAGCAGA TCGCCAAGGC GCTGGAGCGG
AAGGTCTGGC TGCCCTCCGG TGGTTCGCTG GTGATCGACC AGACCGAGGC GATGACGGTC
ATCGACGTCA ACACCGGCAA GTTCACCGGC CAGGGCGGCA ACCTCGAGGA GACCGTCACC
CGGAACAACC TGGAGGCGGC GGAGGAGATC GTCCGCCAGC TCCGGCTCCG GGACATCGGC
GGCATCATCG TCATCGACTT CATCGACATG GTGCTCGAGA GCAACCGCGA GCTGGTGCTC
CGGCGGCTGC TCGAGTGCCT GTCCCGTGAC CGGACCAAGC ACCAGGTCGC GGAGGTCACT
TCGCTCGGCC TGGTCCAGAT GACCCGGAAG CGGGTCGGGC AGGGCCTGCT CGAGGCGTTC
TCGACGCCCT GCGAGTGCTG CAACGGCCGG GGCATCATCA TCTCGTCCGA GCCGGTCGAG
AAGCCGGAGC CGCGCGGCAC GCAGGGCAAG ATGGCGATCG AGAAGGCCGT GGCCGAGAAG
CTCGCCGCCG CCGCCGAGAA CAAGAGCACG TCGGTGGTCG CGGCCACCAG CACCGTGCGG
GAGACCGTCA CCGATTCCAT CCCCGTCGAT GACGGTGCCG CGGCCGGGCG CGCCCGTGAG
GGGCGGCGCT CCCGCGGAAA GGCGGCGGAG TAA
 
Protein sequence
MLENEPFDRA VSSDRDAITD ATTEDRDNGS GASEAPSEPE ARAARPRRRA ASRPAGPPPE 
PEDVPPPVQV TTVPAGADHK VSEPVARPIK GARRSAGAVE DEESAPAAER PATEPAEKTA
GGAAEQSARP EPVADEAARA ASAEPEAGTA EPEDDRAESA QPALAGERTE SGASPTRRRR
IRRRTRSGQA VPSVMTAAVE EVATALRIGP AEDAHGEEPA EPGAAATEAR EGEPAAERST
GVVRPDVVTD PFGFNNSAER PAVPKVTFQS PASLFQPIFQ PPDPAAAIPL SRRAASDEPE
EAEDHAEAER AEEAGEETAT PRRRRRRRGG RGRSRAKEAA ETEAQEPEPE PEKTSAEAAG
RSGAAAEEER PAEEEPAAEQ TSVEQTSTEQ AEAEEQPAET TSETATEQQA AQAEQATGTS
RRRRRRRRRS TEEIEPTPDD PPNTVIRIRA PRTAKPSSSL LDEVQGVRGS TRLEAKKQRR
REGRELGRRR PLILTESEFL ARRESVERIM IIRRNAGRTQ VAVLEDGVLV EHYVDRESNR
SYVGNVYLGK VQNVLPSMEA AFVDIGKGRN AVLYAGEVNF DSAGLEGQPK RIEAALKSGQ
SVLVQVTKDP IGHKGARLTS QITLPGRYLV YVPDGSMTGI SRKLPDKERA RLKQILRKVM
PENAGVIVRT AAEGATEEEL SRDVARLAAQ WESIQRKAKT ASPPELLLGE PDLMIRVVRD
IFNEDFSTLI VQGDEAWNTV EEYVRYVAPH LLDRLKKWDE ETDVFTAYRI DEQIAKALER
KVWLPSGGSL VIDQTEAMTV IDVNTGKFTG QGGNLEETVT RNNLEAAEEI VRQLRLRDIG
GIIVIDFIDM VLESNRELVL RRLLECLSRD RTKHQVAEVT SLGLVQMTRK RVGQGLLEAF
STPCECCNGR GIIISSEPVE KPEPRGTQGK MAIEKAVAEK LAAAAENKST SVVAATSTVR
ETVTDSIPVD DGAAAGRARE GRRSRGKAAE