Gene Tbis_1654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_1654 
Symbol 
ID9168148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp1916255 
End bp1917958 
Gene Length1704 bp 
Protein Length567 aa 
Translation table11 
GC content72% 
IMG OID 
ProductGAF sensor signal transduction histidine kinase 
Protein accessionYP_003652261 
Protein GI296269629 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.309377 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.649993 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGAAA ACGAGCCGGG TCCGCTGATC CCCCACATGC GGCTCGACGA ATTGCTCGCC 
GAGCTGCAGG TGCGGCTCAA CGCCGTGCTG GTCACCCGTG ACCGGGTCCA CGCCCTCCTG
CAGGCCGTGG TCTCCATCAG CAGCGACCTG GACCTGGAGA CCGTGCTGCG GCGGCTGGTC
GAGACCGCCA CCGACCTGGT CGACGCCCGG TACGGGGCGA TGGGCGTGAT CGGCGAGGAC
AACACGCTCA TCCAGTTCAT CCCCGTCGGG CTGAGCGAAG AGGAGATCGC CAAGATCGAT
CACTGGCCTC GCGGCCTCGG ACTGCTCGGC CTGCTGATCA AGGAGCCGCA GACGCTCCGC
CTCGCCGACC TCACCAAGCA CCCCCAGGCG TACGGCTTCC CGCCCGGCCA CCCGCACATG
CGGAGCTTCC TCGGCGTGCC GATCAAGGTG CGCGACGAGG TGTTCGGCAA CCTCTACCTC
GCCGACAAGC GCGGCGGGGG GAGCTTCGAC GAGGACGACG AGGCGATCGT CGTCGCGCTC
GCCACCGCCG CCGGCGTGGC GATCGAGAAC GCCCGCCTGT ACGAGGAGAC CCGGCGCCGG
GAGACCTGGC TCGAGGCGTC CTCGGAGATC ACCACCCGGC TGCTCTCCGG CGCCGACCCC
CGCGAGGTCC TCCTGCTGAT CGCCCGCCGG GCCCGGGAGA TGACCGAGGC CGACCTCGCC
GCGATCCTGC TCCCCGCGCG GGACGACGAC GGGGTGCTCC GGGTCGCGGC CGAGGACCGC
GAACAGGACC GGCTGGTCAC CGGCGGGGAG GTCCCCGTCG CGGGCTCGCT CGCCGGCCAC
GCGTTCGTCA CCCGCGAGCC GGTCACCGTG AGCAACCCGG CCGACACGGA GTTCGCGCTG
GGCCTCACCG GCAGGCAGCC GTACGGCCCG GTGGCCGCCG TGCCGCTCGG CGCGGCCGAT
GAGGTGCGCG GCGTGCTGCT GCTCGGCAAG CTCTCCGGGC GCCTGCCGTT CAGCCAGGCC
GACCTGCGCA TGCTCCACGC CTTCGCCGGG CACGCGGCGA TCGGGCTCGA GCTCGCCGAG
TCGCGCAAGT ACGCCGAGCG GCTCCGGCTG CTGGAGGACC GCGACCGCAT CGCCAAGGAC
CTGCACGACG TCGTCATCCA GCGCCTGTTC GCGGTGGCCA TGACGCTGAT GAGCGCGGCC
CGCCTGGTGG AGGAGCGGCC GGAGGCGTCC TCGCGCCTGC AGAGCGCGAT CGACGAGCTC
GACGACACCA TCCGGCAGAT CCGCACCACG ATCTTCAAGC TCCAGATGCC GGCCGAGACG
GAGCAGAGCC TCCGCTCCAA GATCGTGGAT CTGGTGGAGG GGGCGCGCGG CCACCTGGGG
TTCATGCCGG GCCTGAGCCT GGAGGGCCGG CTGGACACCG AGATCAGCGC CGAGGTCGCC
GACCACCTGC TCGCCGTGCT CCGCGAGGCG CTGTCCAACG TCGTCCGCCA CGCCAAGGCC
ACCCGCGCGG ACGTGTCGGT GCGCAGCGAT GGGAAGCAGG TCACCCTGAT CGTCAAGGAC
AACGGGGTCG GCGTCCCCGA GGGCGGCCGG CGCAGCGGCC TGCGCAACCT CGCCGAGCGC
GCGGAGCGGC TCGGCGGCAC CTTCGAGATC ACCAGGCCGG AGGCCGGGGG GACCATGCTC
ACGTGGACGG CCCCGCTCGG CTAG
 
Protein sequence
MVENEPGPLI PHMRLDELLA ELQVRLNAVL VTRDRVHALL QAVVSISSDL DLETVLRRLV 
ETATDLVDAR YGAMGVIGED NTLIQFIPVG LSEEEIAKID HWPRGLGLLG LLIKEPQTLR
LADLTKHPQA YGFPPGHPHM RSFLGVPIKV RDEVFGNLYL ADKRGGGSFD EDDEAIVVAL
ATAAGVAIEN ARLYEETRRR ETWLEASSEI TTRLLSGADP REVLLLIARR AREMTEADLA
AILLPARDDD GVLRVAAEDR EQDRLVTGGE VPVAGSLAGH AFVTREPVTV SNPADTEFAL
GLTGRQPYGP VAAVPLGAAD EVRGVLLLGK LSGRLPFSQA DLRMLHAFAG HAAIGLELAE
SRKYAERLRL LEDRDRIAKD LHDVVIQRLF AVAMTLMSAA RLVEERPEAS SRLQSAIDEL
DDTIRQIRTT IFKLQMPAET EQSLRSKIVD LVEGARGHLG FMPGLSLEGR LDTEISAEVA
DHLLAVLREA LSNVVRHAKA TRADVSVRSD GKQVTLIVKD NGVGVPEGGR RSGLRNLAER
AERLGGTFEI TRPEAGGTML TWTAPLG