Gene Tbis_1538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_1538 
Symbol 
ID9168032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp1748844 
End bp1750499 
Gene Length1656 bp 
Protein Length551 aa 
Translation table11 
GC content68% 
IMG OID 
ProductSSS sodium solute transporter superfamily protein 
Protein accessionYP_003652146 
Protein GI296269514 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.535704 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCAGG CGTTAGCCAT CATCCTGTTC ATCCTCTTTG TCGCGGTAAC GCTGCTCATC 
ACCGTTTGGG CGAGCCGGCA AACCAAGGAC GCGGGTGACT TCTACGCCGG CGGGCGCTCG
TTCTCCGGGA TGCAGAACGG TCTGGCGATC AGTGGCGACT ACCTGTCGGG CGCCTCATTT
CTCGGCATCG CGGGCGTGAT CGCCCTATAC GGCTATGACG GCTTCCTCTA TTCGATCGGC
TTCCTGGTGG CCTGGCTGCT GGCGTTGCTG CTCGTGGCCG AGCTGTTCCG CAACTCCGGC
AAGTACACCA TGGCCGACGT GGTGGCCTTC CGGATGAGCG CGCGTTCGGT CCGCATCGCC
GCCGGGGTCT CCACCATCAC CGTGTCGATC GTCTACCTGC TCGCGCAGAT GGTCGGCGCC
GGTGCGCTCG TGTCCATGCT GCTCGGCCTG GACGGCCCGG TCGCCAACGC CGCCATCATC
GTCCTGGTCG GCATGCTGAT GATCATCTAC GTGGCGGGCG GCGGCATGAA GAGCACGACC
TGGGTGCAGA TCATCAAGGC CGTCCTGCTG ATGGTCAGCG CCACGATCGT GACGGTCCTG
GTGGCCGCCA AGTTCGGCTT CAACATCTCC GAGCTGCTCC GGCAGGCCGC CGACCAGAGC
GGGCAGGGTG AGGCGTTCCT CGAGCCCGGG CTGCGGTACG CGACCGAGGC GGAGGGCCTG
GCGGGCAAGC TCGACCTCAT CAGCCTCGGC CTGGCGCTGG TCCTGGGCAC GGCCGGCCTC
CCGCATGTGC TGATGCGCTT CTACACCGTG CCGACCGCGA AGGAGACCCG CAAATCCGTG
CTCGTGTCCA TCGGCCTCAT CGGCACCTTC TACCTGTGCA CCCTGATCCT GGGCTTCGGC
GCGGCCGCCG TGGTCGGCAG CGAGGAGATC GCCAAGGCGA ATCCCGGGGG CAACACGGCG
GTCGCTCAGC TCGCGGAACG GCTCGGCGAG ATGCTCTTCG GCGAGATCGG GGCGGCCGTC
CTGCTGGCCG TCGTCTCCTC CGTGGCCTTC GCCACCATCC TCGCCGTGGT CGCCGGGCTC
ACCCTCGCCT CCTCCTCGTC CGTCGCGCAC GACCTGTACG CGCACGCGGG CAAGCGCGGC
CGGATCAACG AGGCGGATGA AGTACGCTTC GCCCGGATCG CCGCGTTCGT CATCGGCGGG
GTGTCGATCG TGCTCGGCAT CTTCGCGCAG CGGCTCAACG TGGCGTTCCT GGTCTCCCTG
GCGTTCGCGA TGGCCGCCTC CGCCAACCTT CCCGCGATCC TTTACAGCCT GTTCTGGGAA
CGTTTCAACG CCGCGGGCGC GATCGCCGCG ATCTACGGCG GGCTCGGCTC GTCTGTCCTC
CTGGTGTTCT TCTCGCCGGT GGTCTCCGGA TCTCCGGGCT CGCTCTTCCC CGATGTCGAC
TTCCACTGGT TCCCGCTCAG CAATCCGGGC CTGATCTCCA TCCCGTTCGG CTTCTTCTGC
GGCTGGCTCG GCACGATCCT CAATAGGGAG TACGACCCGC GGAAGTTCGC CGAGATGGAG
GTACGGTCGC TCACCGGCGT GGGAGCGGTG CGCGGGGAGC AGTGGTTCGA GGCCCGGCGC
ACCCGGCCGG TACGGCGTGC CGGCCTCCCC TACTGA
 
Protein sequence
MSQALAIILF ILFVAVTLLI TVWASRQTKD AGDFYAGGRS FSGMQNGLAI SGDYLSGASF 
LGIAGVIALY GYDGFLYSIG FLVAWLLALL LVAELFRNSG KYTMADVVAF RMSARSVRIA
AGVSTITVSI VYLLAQMVGA GALVSMLLGL DGPVANAAII VLVGMLMIIY VAGGGMKSTT
WVQIIKAVLL MVSATIVTVL VAAKFGFNIS ELLRQAADQS GQGEAFLEPG LRYATEAEGL
AGKLDLISLG LALVLGTAGL PHVLMRFYTV PTAKETRKSV LVSIGLIGTF YLCTLILGFG
AAAVVGSEEI AKANPGGNTA VAQLAERLGE MLFGEIGAAV LLAVVSSVAF ATILAVVAGL
TLASSSSVAH DLYAHAGKRG RINEADEVRF ARIAAFVIGG VSIVLGIFAQ RLNVAFLVSL
AFAMAASANL PAILYSLFWE RFNAAGAIAA IYGGLGSSVL LVFFSPVVSG SPGSLFPDVD
FHWFPLSNPG LISIPFGFFC GWLGTILNRE YDPRKFAEME VRSLTGVGAV RGEQWFEARR
TRPVRRAGLP Y