| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbis_1408 |
|---|
| Symbol | |
|---|
| ID | 9167900 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobispora bispora DSM 43833 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014165 |
|---|
| Strand | + |
|---|
| Start bp | 1590506 |
|---|
| End bp | 1591924 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | UDP-N-acetylmuramate/alanine ligase |
|---|
| Protein accession | YP_003652019 |
|---|
| Protein GI | 296269387 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.0738105 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTGG TCAAGCCCGT GGACCCCGTC CCGGCCGCCG AGCTGGGCCG GGTCCACTTC
ATCGGCATCG GGGGAGCGGG GATGTCGGGC ATCGCCCGCA TCCTGCTCAA GCGCGGCGTG
CGGGTCTCGG GGAGCGACGT GCGCGACTCC GCGGTGCTCG CCGAGCTCCG CGAGCTGGGC
GCCACCGTGC ACATCGGCCA CGCCGCCGGG AACGTCGGGG ACGTGGACAC GGTCGTCGTC
TCCACGGCGA TCCGGGACTC CAACCCCGAG CTGCAGGAGG CGCGCCGCCG GAACCTGCGC
GTGATCCCCC GGGCCGCGGC GCTCGCCGCC GTGATGGAGG GACGGACCGG CATCGCGGTG
GCCGGGACCC ACGGGAAGAC CACCACCACC TCGATGCTCA CCGTGGCGCT GCAGAAGTGC
GGCGCCGACC CGTCGTACTG CGTGGGCGGC CTGCTCGCCA CCACGGGCCT CGGCGCCGAC
GACGGCGCCG GGGACCTGTT CGTGGCGGAG GCCGACGAGA GCGACGGGTC GTTCCTCATG
CTCCGGCCCG CCATCGCGAT CGTCACGAAC GTCGAGGCGG ACCACCTCGA CAACTACGGC
GACGTGCGGG CGGTGCACGA GAGCTTCGCC CGGTTCGTGG AGCGGGTCGG GTCGCTGCTC
GTGCTCTGCG CCGACGACCC CGGCTCGGCC GCCCTCGCCG CCCCGGCGCG CGAGCGCGGT
CTCACCGTCG TCACGTACGG CGAGTCCGCC GGCGCCGACT ACCGGACCGT CGACGTCGTG
CCCGAGGGCC TCGGGGTGGA GTTCGCGGTG GCGGCGGGCT CGCCCGGCCC CGGGTGGCCG
CTCCGGGTGC GCCTCGCCGT ACCGGGCCGG CACAACGCGC TCAACGCGAC CGCGGTGATC
GCCGTGGCCG ACCGGCTCGG GCTGCCGCTC GGCGAGGTCG CGGCGGGCCT GGCCGCCTTC
GGCGGGGCCA AGCGCCGCTT CGAGGCCAAG GGCGAGGCGG GCGGCGTGGC GGTGTTCGAC
AGCTACGCCC ACCACCCGAC CGAGCTCACC GCGGACCTGC GCGCCGCCCG GGAGGTGAAC
GCCGGCCGGG GCCGCGTGAT CGCGGTGTTC CAGCCGCACC TGTACTCGCG GACCAGGTTC
TTCGCCGACG CCTTCGGCGC GGCCCTGGGG CTCGCGGACG AGGTGATCGT GCTCGACGTG
TACGGCGCGC GGGAGGACCC CGAGCCCGGG GTCACCGGCG CGCTCATCGC GGAGCGGGTG
CCGCTCCCGG CCGACCGGGT GGTCTACGCC CCGGACCGGG AGAGCGTGCC CGCCCTCGTC
GCCGGCCGGG CGCGTCCCGG GGACATCGTG CTCACCATGG GCGCCGGTGA CGTGACCGAG
CTCGGCCCGC GGATCGTGGA GGAGCTGGCG GCCCGGTGA
|
|---|
| Protein sequence | MSLVKPVDPV PAAELGRVHF IGIGGAGMSG IARILLKRGV RVSGSDVRDS AVLAELRELG
ATVHIGHAAG NVGDVDTVVV STAIRDSNPE LQEARRRNLR VIPRAAALAA VMEGRTGIAV
AGTHGKTTTT SMLTVALQKC GADPSYCVGG LLATTGLGAD DGAGDLFVAE ADESDGSFLM
LRPAIAIVTN VEADHLDNYG DVRAVHESFA RFVERVGSLL VLCADDPGSA ALAAPARERG
LTVVTYGESA GADYRTVDVV PEGLGVEFAV AAGSPGPGWP LRVRLAVPGR HNALNATAVI
AVADRLGLPL GEVAAGLAAF GGAKRRFEAK GEAGGVAVFD SYAHHPTELT ADLRAAREVN
AGRGRVIAVF QPHLYSRTRF FADAFGAALG LADEVIVLDV YGAREDPEPG VTGALIAERV
PLPADRVVYA PDRESVPALV AGRARPGDIV LTMGAGDVTE LGPRIVEELA AR
|
|---|
| |