Gene Tbis_1249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_1249 
Symbol 
ID9167741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp1416683 
End bp1417549 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content72% 
IMG OID 
Product3-methyl-2-oxobutanoatehydroxymethyltransferase 
Protein accessionYP_003651861 
Protein GI296269229 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.699471 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.0476756 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCGA ATTCCGCCGC ATCCAGCCCC TCAACGCCGG CCCAGCCCAC CGCGCTGTAC 
GGGGGCAAGA CCGGGCGGAG GGTCACGGTC CGCGACATCG CGGCCGCCAA GGAGCGGGGC
GAGCGGTGGC CCATGGTCAC CGCGTACGAC GCCCTGACGG CGAGGATCTT CGACGAGGCC
GGCATCCCGG TGCTGCTCGT CGGCGACTCG GCCGCCATGG TCGTCTACGG GTACGACTCG
ACCCTGCCGG TCACCGTGGA CGACCTGCTC CCGCTCACCG CCGCGGTCGT CCGGGGAACC
TCCCGGGCGA TGATCGTGGC CGACCTGCCG TTCGGCTCCT ACCAGGCCTC GCCGCAGCAG
GCCCTGGAGA CCGCGGCCCG GTTCATGAAG GAGGCCGGCG CGCACGCCGT CAAGCTGGAG
GGCGGGCACC GGGTGATCCC CCAGGTCGAG CTGCTCGTCT CGTCCGGTGT CCCGGTCATG
GGCCACCTCG GCCTCACCCC CCAGTCCGTC AACGTGCTCG GCGGCTACCG GGTGCAGGGC
CGCGGGCAGG CGGGTGACGA GCTGCTCATG GCCGCCAAGG CACTGGAGCA CGCGGGCGCG
TTCGCCATCG TGCTCGAGTG CGTGCCCAGC GAGCTCGCGC AGCGGGTCAC CGCCTCCCTC
GGCATTCCCA CCATCGGCAT CGGGGCCGGG CCGCACACCG ACGCCCAGGT CCTGGTCTGG
CAGGACCTGA TGGGGCTCAC CCCGCACCAG CCCAAGTTCG TGAAGAAGTA CTTCGACCTC
GCCGGCGAGA TGAGCCGGGC GGTCCGCGCG TTCGCCGACG AGGTGGTCTC CGGCGCCTTC
CCCACCGAAG CGCACAGCTA TCACTGA
 
Protein sequence
MSANSAASSP STPAQPTALY GGKTGRRVTV RDIAAAKERG ERWPMVTAYD ALTARIFDEA 
GIPVLLVGDS AAMVVYGYDS TLPVTVDDLL PLTAAVVRGT SRAMIVADLP FGSYQASPQQ
ALETAARFMK EAGAHAVKLE GGHRVIPQVE LLVSSGVPVM GHLGLTPQSV NVLGGYRVQG
RGQAGDELLM AAKALEHAGA FAIVLECVPS ELAQRVTASL GIPTIGIGAG PHTDAQVLVW
QDLMGLTPHQ PKFVKKYFDL AGEMSRAVRA FADEVVSGAF PTEAHSYH