Gene Tbis_1172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_1172 
Symbol 
ID9167662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp1334416 
End bp1335306 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content72% 
IMG OID 
Producthelix-turn-helix domain-containing protein 
Protein accessionYP_003651787 
Protein GI296269155 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGGC CGCAAAGAGC CACCGCGAAG CCCGCCCCGC GCGGCGGGCC GACGGTCATG 
CGCATCCTCG TCGGCGCGCA GCTCAGGCGG TTACGCCGGG CATCGGGCAC CACCCCCGGC
CAGGCGGCGC GGGCCATCCG GGCGTCGAAC GCCAAGATCA GCCGGATGGA GCTCGGCCGC
GTCGGGTTCA AGGAGCGTGA CATCGCCGAC CTGCTCACGC TCTACGGCGT GACCGACCCC
CACCATCGCG AGACCCTGCT CGGCATGGCC CGGCAGGCGA ACGCCCCCGG CTGGTGGCGC
GAGTACCACG ACGTGCTGCC GAGCTGGTTC GAGTCCTATA TCGGCCTGGA GGACGCCGCC
TCGGTCGTCC GCACCTTCGA GGTCCAGTTC ATCCCCGCGC TGCTCCAGAC CCCCGACTAC
GCACGCGCGG TGATCAAGCA CCGCCACAAG GACGCGACCG AGCGCGAGGT GGAGCAGCGG
GTCGCCGTCC GGATGCGGCG GCAGGAGCGG CTGACCGGGC CGGACCCCCT GCGGTTGTGG
GCCGTGGTGG ACGAGGCGGC GCTGCGCCGC CCGTTCGGGG GCACCAAGGT GCTCCGGGGC
CAGATCGAGC ACCTGATCGA GATCACCACC ATGCCGAACG TCACCCTCCA GGTGCTCCCG
TTCGACCGGG GCGGCCATTC GGCCGCGGCC GGCCCGTTCA CGATCTTGCG GTTCGAGTCC
CCGGACCTGC CGGACGTGGT CTACATGGAG CAGCTCAACA GCGCCGCCTA CCTCGACAAG
CCCGCCGAGA CCGAGCCGTA CCTGCGGGTG ATGAACGCCC TATCCGTGGA GGCGCACTCG
CCCGCGCGAT CGCGCGCGTT CCTCGAGCGG CTGCTCGACG GGCTCGGCTG A
 
Protein sequence
MSRPQRATAK PAPRGGPTVM RILVGAQLRR LRRASGTTPG QAARAIRASN AKISRMELGR 
VGFKERDIAD LLTLYGVTDP HHRETLLGMA RQANAPGWWR EYHDVLPSWF ESYIGLEDAA
SVVRTFEVQF IPALLQTPDY ARAVIKHRHK DATEREVEQR VAVRMRRQER LTGPDPLRLW
AVVDEAALRR PFGGTKVLRG QIEHLIEITT MPNVTLQVLP FDRGGHSAAA GPFTILRFES
PDLPDVVYME QLNSAAYLDK PAETEPYLRV MNALSVEAHS PARSRAFLER LLDGLG