| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbis_0869 |
|---|
| Symbol | |
|---|
| ID | 9167355 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobispora bispora DSM 43833 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014165 |
|---|
| Strand | - |
|---|
| Start bp | 987242 |
|---|
| End bp | 988552 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | extracellular solute-binding protein family 1 |
|---|
| Protein accession | YP_003651486 |
|---|
| Protein GI | 296268854 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 0.293785 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAAAC TCACCCCGGT GGTCGCGCTG CTCGCGCTCG CGGCCACGGC GTGTGGCTCG
TCCTCGGACG AGCCTTCCCA GGAGAGCACC TCCTCCGCCG CCGCCAAGCC GCTCGCCGGC
GTCAAGATCG AGGTCGCCGC GAAGTGGACC GGCGAGGAGC AGGCCAACTT CGAGCAGGTC
CTCAAGGCGT TCGAGGAGAA GACCGGCGCC ACCGTCACCT ACGCCTCCAC CGGTGAGGAC
ACCGCCGCGT ACCTCGGCCC GCGGATCGAG GCCGGCACCC CGCCGGACGT GGCGATCCTC
CCCCAGCCCG GCCTGGTCCA GCAGTACGCC GACCAGAACG CGCTCAAGCC GCTCTCCCAG
GAGGTTCTGG CGCAGATCGA CCAGAACTAC ACCCCGTACT GGAAGGAGCT CGGCTCCGCC
AACGGCCAGG TGTACGGCGT GCTCGTGAAG GCCGCGCACA AGTCCCTGAT CTGGTACCGG
CAGCAGGCGT TCGACGACGC CGGGGTGCAG CCGGCCGCCA CCTGGGACGA GCTGATCGGC
ACGACCGCGC AGACGCTCGC CGACTCCGGC ACCCCGCCGT TCGCCCTCTG CGGCGCCTCG
GGCTGGACCC TCACCGACCT GTTCGAGAAC ATCTACCTCT CCACGGCCGG GCCGGAGAAC
TACGACAAGC TCTCCCGGCA CGAGATCCCG TGGACCGACC CCACGGTGAC CGAGGCGCTG
GAGAAGATGG CGCAGATCTT CGGGAAGCAG GAGTTCATGC TGGGCGGCTC CTCCGGCGCG
CTGCAGACCG ACTTCCCGAC CTGCGTCACT CAGGTCTTCG GCCAGAAGAA GGCCGCCATG
GTGATCGAGG CCGACTTCGT CGCCGCGTCC GCCACCGAGT CCGGTGCGAA GATCGGCGAG
GACGCCAAGA TCATGCCGTT CCCGAAGGTC GGCGACACCC AGCCGGTCGT GCTCGGCGGT
GACATCGCCG TGGCCCTGAA GGACACCCCG GGCGCGATGG CGCTGCTGGA GTTCCTCGCC
TCCAAGGAGG GCGGCGAGAT CTGGGCGAAG CTCCCCGGCT ACCTCTCCCC CAACCGGAAC
GTCTCCCCGG ACAACTACCC GAACGAGCTG ACCAAGCAGC TCGCGCAGAC CATCATCTCG
GCCGGTGAGT CCGTCCGGTA CGACATGTCC GACCTCGCGC CGAGCGCGTT CGGCGGCACG
GACGGCAAGG GCGAGTGGAA GCACCTGCAG GACTTCCTGC GCGACCCCTC CGACGTGAAG
GGCACGCAGG AGAAGCTCGA GGCTGACGCG GCCAAGGCCT GGAAGAAGTA A
|
|---|
| Protein sequence | MRKLTPVVAL LALAATACGS SSDEPSQEST SSAAAKPLAG VKIEVAAKWT GEEQANFEQV
LKAFEEKTGA TVTYASTGED TAAYLGPRIE AGTPPDVAIL PQPGLVQQYA DQNALKPLSQ
EVLAQIDQNY TPYWKELGSA NGQVYGVLVK AAHKSLIWYR QQAFDDAGVQ PAATWDELIG
TTAQTLADSG TPPFALCGAS GWTLTDLFEN IYLSTAGPEN YDKLSRHEIP WTDPTVTEAL
EKMAQIFGKQ EFMLGGSSGA LQTDFPTCVT QVFGQKKAAM VIEADFVAAS ATESGAKIGE
DAKIMPFPKV GDTQPVVLGG DIAVALKDTP GAMALLEFLA SKEGGEIWAK LPGYLSPNRN
VSPDNYPNEL TKQLAQTIIS AGESVRYDMS DLAPSAFGGT DGKGEWKHLQ DFLRDPSDVK
GTQEKLEADA AKAWKK
|
|---|
| |