Gene Tbis_0543 details

Gene Information

• Locus tag: Tbis_0543
• ID: 9167027
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobispora bispora DSM 43833
• Kingdom: Bacteria
• Replicon accession: NC_014165
• Strand: +
• Start bp: 597261
• End bp: 600728
• Gene Length: 3468 bp
• Protein Length: 1155 aa
• Translation table: 11
• GC content: 67%
• Product: DNA-directed RNA polymerase subunit beta
• Protein accession: YP_003651163
• Protein GI: 296268531

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.174564
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 36
• Fosmid unclonability p-value: 0.14479
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

TTGGCAGCCT CGCGCAACGC CTCCGCCGCA TTCGCCAGTC CTCGCTTGTC GTTTGCACGC 
ATCCAGGAAC CCCTGGAAGT TCCGGATCTT CTCGCCGTAC AGATCGAGTC CTTCGACTGG 
CTGATCGGCA ACGAGAGATG GAAGGCCCGG GTCGAGGCAG CTCGCAAGGC CGGGCGCAAG 
GACATCCCGA TGCAGTCGGG GCTCGAAGAG GTCTTCGAGG AGATCAGCCC CATCGAGGAC 
TTCTCCGGCA CCATGTCCTT GTCGTTCCGG GACCACCGGT TCGAGCCGCC CAAGCACACC 
ATCGAGGAGT GCCGGGACAA GGACATGACC TACTCCGCCT CGCTCTTCGT GACGGCGGAG 
TTCATCAATA ACACCACGGG GGAGATCAAG AGCCAGACGG TGTTCATGGG CGACTTCCCG 
CTCATGACGC CGAAGGGCAC GTTCATCATC AACGGCACCG AGCGTGTCGT GGTCTCCCAG 
CTGGTGCGCT CGCCGGGCGT CTACTTCGAT CGGACGGTGG ACAAGACGTC GGACAAGGAC 
GTCTACAGCT GCAAGATCAT CCCGTCCCGG GGCGCTTGGC TCGAGTTCGA GATCGACAAG 
CGCGACAGCG TCGGCGTGCG TATCGACCGG AAGCGGAAGC AACCGGTCAC CGTGCTGCTC 
AAGGCGTTGG GCTGGACCAA CGATCGCATC CTCGAACGGT TCGGTCAGTA CGAGTCGATG 
CGCGCGACCC TGGAGAAGGA CCACACCACC GGCCAGGAGG ACGCGCTCAT CGACATCTAC 
CGCAAGCTGC GTCCGGGTGA GCCGCCGACC AAGGAGTCCG CGCAGGCGCT GCTCGAGAAC 
CTCTACTTCA ACCCGAAGCG CTACGACCTC GCCAAGGTCG GCCGCTACAA GCTCAACAAG 
AAGCTCGGGG TCGACGCCGA CATCACCCAG GGCACGCTGA CCGAGGACGA CATCGTCGCG 
ACGATCGAGT ACCTCGTCCG GCTGCACGCC GGCGAGGAGA CGATGATCGG CGCCAACGGG 
CGCGAGGTGA TCGTCGAGAC CGACGACATC GACCACTTCG GCAACCGCCG CCTGCGCACG 
GTCGGTGAGC TGATCCAGAA CCAGGTCCGG CTGGGCCTCG CCCGGATGGA GCGGGTCGTG 
CGCGAGCGCA TGACCACGCA GGACGTCGAG GCGATCACGC CGCAGACCCT GATCAACGTC 
CGGCCGGTCA CCGCCTCGAT CCGGGAGTTC TTCGGCACCT CCCAGCTGTC GCAGTTCATG 
GACCAGACCA ACCCGCTGGC CGGTCTGACC CACAAGCGGC GGCTGAACGC GCTCGGCCCG 
GGCGGTCTGT CCCGGGAGCG GGCCGGGTTC GAGGTCCGCG ACGTGCACCC GTCGCACTAC 
GGCCGGATGT GCCCGATCGA GACGCCGGAA GGGCCGAACA TCGGTCTCAT CGGCTCGCTG 
GCCACGTACG CCCGGGTCAA CGCCTTCGGC TTCGTCGAGA CGCCGTACCG CAAGGTCGTC 
GACGGCCGGG TGACCGACCA GATCGAGTAC CTGACCGCGG ACGAAGAGGA CCGTTACGTC 
GTCGCCCAGG CGAACACGGT CGTCAACCCT GACGGCACCT TCGCCGAGAA GCGCGTGCTC 
GCGCGGCGCA AGGGCGGTGA GTTCGAGGCC GTCGACCCGT CCGAGGTCGA CTACATGGAC 
GTCTCGCCGC GGCAGATGGT GTCCGTCGCG ACCGCGATGA TCCCGTTCCT CGAGCACGAC 
GACGCCAACC GGGCGCTCAT GGGCTCGAAC ATGCAGCGCC AGGCGGTGCC GCTGCTCAGG 
AGCGAGGCCC CGCTGGTCGG TACCGGCATG GAGTACCGGG CGGCCACCGA CGCCGGCGAC 
GTGATCATCG CCGAGAAGTC GGGCGTGGTC GAGGAGGTCT CCGCCGACTA CATCACGGTC 
CTCAACGACG ACGGCACCCG GACCACCTAC CGGGTCGTCA AGTTCAAGCG CTCCAACCAG 
GGCACCTGCT ACAACCAGAA GCCCATCGTC GAGGAGGGCG ACCGGGTCGA GCAGGGCCAG 
GTGATCGCGG ACGGCCCGTG CACCGAGAAC GGCGAGATGG CGCTGGGCAA GAACCTGCTC 
GTCGCCTTCA TGCCGTGGGA GGGGCACAAC TACGAGGACG CGATCATCCT GTCCCAGCGC 
CTGGTGCAGG ACGACGTGCT CACCTCGATC CACATCGAGG AGCACGAGGT CGACGCCCGC 
GACACCAAGC TGGGGCCCGA GGAGATCACC CGGGACATCC CGAACGTCTC CGAGGAGGTC 
CTCGCCGACC TCGACGAGCG CGGCATCATC CGCATCGGTG CCGAGGTGAC CACCGGTGAC 
ATCCTCGTCG GCAAGGTCAC CCCGAAGGGG GAGACCGAGC TGACCCCCGA GGAGCGGCTG 
CTGCGCGCGA TCTTCGGTGA GAAGGCGCGC GAGGTCCGCG ACACCTCGCT CAAGGTCCCG 
CACGGCGAGT CGGGCAAGGT CATCGGCGTC CGGGTGTTCC GCCGCGAGGA CGGCGACGAG 
CTGCCCCCGG GCGTCAACGA GCTGGTCCGG GTGTACGTGG CGCAGAAGCG CAAGATCACC 
GACGGTGACA AGCTCGCCGG CCGCCACGGG AACAAGGGCG TCATCGCCAA GATCCTCCCG 
GTGGAGGACA TGCCGTTCCT CGAGGACGGC ACGCCGGTCG ACATCATCCT CAACCCGCTC 
GGCGTCCCCG GCCGGATGAA CCTCGGCCAG GTGCTCGAGA CCCACCTCGG CTGGGCCGCC 
AAGCAGGGCT GGGACATCTC CGGCGTCGAG GAGGAGTGGG CCAAGCGGCT CCGCGAGAAG 
GGCATGGAGA AGGTCGGCCC GGACACCAAG GTGGCCACGC CGGTCTTCGA CGGCGCCCGC 
GAGGAGGAGA TCGTCGGCCT GCTCCAGCAC ACCCTGCCCA ACCGGGACGG CCAGCGGCTG 
GTCGGCCCGA ACGGCAAGGC GATCCTGTAC GACGGCCGGT CCGGTGAGCC GTTCCCGTAC 
CCGGTCTCGG TGGGCTACAT CTACATCCTC AAGCTGGCCC ACCTGGTCGA CGACAAGATC 
CACGCCCGGT CGACCGGTCC GTACTCGATG ATCACCCAGC AGCCCCTGGG CGGTAAGGCG 
CAGTTCGGTG GGCAGCGCTT CGGCGAGATG GAGGTGTGGG CCCTCGAGGC GTACGGCGCC 
GCCTACGCGC TGCAGGAGCT GCTGACGATC AAGTCGGACG ACGTCACGGG CCGTGTGAAG 
GTCTACGAGG CCATCGTCAA GGGCGAGAAC ATCCCCGAGG CGGGTATCCC CGAGTCCTTC 
AAGGTCCTGA TCAAGGAGAT GCAGTCACTC TGCCTGAATG TCGAGGTCCT CTCGAGCGAC 
GGCATGTCGA TCGAGATGCG CGAGGCGGAG GAGGACGTCT TCCGCGCCGC CGAGGAACTC 
GGCATCGACC TGTCCCGGCG CGAGCCGAGC AGTGTCGAAG AGGTGTGA 

 

Protein sequence

MAASRNASAA FASPRLSFAR IQEPLEVPDL LAVQIESFDW LIGNERWKAR VEAARKAGRK 
DIPMQSGLEE VFEEISPIED FSGTMSLSFR DHRFEPPKHT IEECRDKDMT YSASLFVTAE 
FINNTTGEIK SQTVFMGDFP LMTPKGTFII NGTERVVVSQ LVRSPGVYFD RTVDKTSDKD 
VYSCKIIPSR GAWLEFEIDK RDSVGVRIDR KRKQPVTVLL KALGWTNDRI LERFGQYESM 
RATLEKDHTT GQEDALIDIY RKLRPGEPPT KESAQALLEN LYFNPKRYDL AKVGRYKLNK 
KLGVDADITQ GTLTEDDIVA TIEYLVRLHA GEETMIGANG REVIVETDDI DHFGNRRLRT 
VGELIQNQVR LGLARMERVV RERMTTQDVE AITPQTLINV RPVTASIREF FGTSQLSQFM 
DQTNPLAGLT HKRRLNALGP GGLSRERAGF EVRDVHPSHY GRMCPIETPE GPNIGLIGSL 
ATYARVNAFG FVETPYRKVV DGRVTDQIEY LTADEEDRYV VAQANTVVNP DGTFAEKRVL 
ARRKGGEFEA VDPSEVDYMD VSPRQMVSVA TAMIPFLEHD DANRALMGSN MQRQAVPLLR 
SEAPLVGTGM EYRAATDAGD VIIAEKSGVV EEVSADYITV LNDDGTRTTY RVVKFKRSNQ 
GTCYNQKPIV EEGDRVEQGQ VIADGPCTEN GEMALGKNLL VAFMPWEGHN YEDAIILSQR 
LVQDDVLTSI HIEEHEVDAR DTKLGPEEIT RDIPNVSEEV LADLDERGII RIGAEVTTGD 
ILVGKVTPKG ETELTPEERL LRAIFGEKAR EVRDTSLKVP HGESGKVIGV RVFRREDGDE 
LPPGVNELVR VYVAQKRKIT DGDKLAGRHG NKGVIAKILP VEDMPFLEDG TPVDIILNPL 
GVPGRMNLGQ VLETHLGWAA KQGWDISGVE EEWAKRLREK GMEKVGPDTK VATPVFDGAR 
EEEIVGLLQH TLPNRDGQRL VGPNGKAILY DGRSGEPFPY PVSVGYIYIL KLAHLVDDKI 
HARSTGPYSM ITQQPLGGKA QFGGQRFGEM EVWALEAYGA AYALQELLTI KSDDVTGRVK 
VYEAIVKGEN IPEAGIPESF KVLIKEMQSL CLNVEVLSSD GMSIEMREAE EDVFRAAEEL 
GIDLSRREPS SVEEV