Gene Tbis_0516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_0516 
Symbol 
ID9166999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp565040 
End bp565819 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content69% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003651136 
Protein GI296268504 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0841499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.0258312 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTGA ACGGAGCAGC TGCGATCGTC ACGGGCGGCG CGAGCGGCCT CGGTGAGGCC 
ACCGCCCGTG AGCTGGCACG AATCGGCGCC ACGGTGCTCG TCGCGGACAT CAACGCGGAG
CGGGGCAAGA AGATCGCCGA CGAGATCGGC GGTGTGTTCG CGCAGACCGA CGTGGCCGAC
GAGGCCTCGG TGCAGGCCGC GGTCGACGCC GCCGTCGCCA CCGGCAAGCC GCTGCGCGCG
GTGATCAACT GTGCGGGCAT CGGCTGGGCC GAGCGGACCG TGAACCGGGA CGGCTCGCCG
CACAGCCTCG CCTCCTACCG CAAGGTGATC GACGTCAACC TGATCGGCAC CTTCAACTTC
ATGCGGATCG GCGCGGCCGC CATGGCCAAG ACCGACCCCG TGGACAGCGA CAACTCCCGC
GGTGTGATCA TCAACACCTC GTCGGTCGCC GGCATCGAGG GCCAGACCGG CCAGGTCGCC
TACTCCGCGT CCAAGGGCGG CATCATCGGT ATGACCCTGC CGGCCGCCCG TGACCTGTCG
GTCATCGGTG TCCGCGTGCT CACCATCTGC CCGGGCATCA TCGACACCCC GATCTACGGC
ACCATCGGCA GCAAGGACGT CGAGGAGTTC AAGGCCCGGC TCCTCGCCCC GGTGGCGTTC
CCGAAGCGCA TGGGCCGCCC GGAGGAGTTC GCCCACCTCG TCCGGTCGCT CATCGAGAAC
GACTACATGA ACGGCGAGGT CATCCGGTTC GACGCCGGTA TCCGGTTCCA GCCCAAGTGA
 
Protein sequence
MDLNGAAAIV TGGASGLGEA TARELARIGA TVLVADINAE RGKKIADEIG GVFAQTDVAD 
EASVQAAVDA AVATGKPLRA VINCAGIGWA ERTVNRDGSP HSLASYRKVI DVNLIGTFNF
MRIGAAAMAK TDPVDSDNSR GVIINTSSVA GIEGQTGQVA YSASKGGIIG MTLPAARDLS
VIGVRVLTIC PGIIDTPIYG TIGSKDVEEF KARLLAPVAF PKRMGRPEEF AHLVRSLIEN
DYMNGEVIRF DAGIRFQPK