Gene Tbis_0340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_0340 
Symbol 
ID9166817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp386122 
End bp387378 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content67% 
IMG OID 
Producttetratricopeptide domain-containing protein 
Protein accessionYP_003650964 
Protein GI296268332 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.469664 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGACC ACCTCAAGGC AAAACGCCGG AGTGAGGGGA TGCACGGGAA CGCATTCGAG 
CCGATTCATA TCCCTATTTG GGTTTGGGGC CGGGAAGAAA CCCGCCAAAT CCTCAAGAAA
CGTGATATGG CGGGCTTGTT CAACATCGCG CTCAAGTACG CGGGGGCCAG TCAGGTCCGC
ATCAGTGCCG CGACCGGCAT CGCCCAGGGC CGCATCAGCC AGATCATGCG CGGTCAGCGT
CAGGTCACCG ACCTTGAGGT GCTCGAGCGC ATCGCCACCG GACTCGGCTT GCCCGACCAT
GCCCGCATGC TGCTCGGCCT TGCCCCACTT GATCTTGCTT TCCCTACCGA TGACCACGAC
GAGGAGCACC GACAGCAGGC CGAGGAACTG CGCACCCGGA TCGAAGCGGC GGCCACCGTG
GATGCCACGA CGGTGCAGAT TCTGGCCACC GATACCAACA ACCTGCGCTT GCTGGATCGC
CGGCTCGGCG GCCTGGCCAT CGCCGACAAA ATGCGCGCCC AAATATCCCA AATAGAACGC
GTCCACCGCC ACGCGGTACG GCCCGGCATA CGCGCACAGC TGGCACATGT TCTGTCGGAA
ACCGCCGCTC TGGCCGGCTG GCAGGCCCTC GACCGGTGTG CCCTAGCCGA CGCGTGGGAC
TACCACGAGA CCGCCATATC CGCCGCCCGT GAAGCCGATG ACCCCGCGCT GCTCGCCTAC
GCTCGCGGAC AGCAGGCTTA TGTTCTGATC GACCTGGGAA GGCCGGCGGA AGCCGCCGAG
CTACTCCACC ACGTCCGCCA CACCTACGAC CGCCGTGTTC CCGGCCATCT GCGTACCTGG
CTCGCCGCCG CCGAGGCCGA AGCCGCCGCG ATCCTCGGCG ATGAGGCGAC CACCCGCACA
GCGCTCGACC AGGCCGCCAC GCTCCTCCCC AAGGAAGACG CCGACCCGAG CTTGCCGTAC
GTGGCCCTCA ACGCTCACCA CCTGGCCCGC TGGCGCGGTA ACTGCCTGGT TCGCTTCGGC
GACCCCGAAA CCATCGAAGA TCTGCGGTCA GCGCTCGCGG GCATGGACGG CACGTTCAAC
CGCGCCGAGG CCGGGCTCAG ATGCGACCTC GCCCACGCCC TGCTCGCGCG AGGCGAAGCC
GAGGCCGCAC AACCGCACCT TTACCGTGCC GAACACCTGG CCATGATGAT TGGCTCACGC
CGTCACGGCC GCCGTATCGC CGAGCTCAAG CGCGCGGTTA CCCGCGCGCT CCGTTGA
 
Protein sequence
MHDHLKAKRR SEGMHGNAFE PIHIPIWVWG REETRQILKK RDMAGLFNIA LKYAGASQVR 
ISAATGIAQG RISQIMRGQR QVTDLEVLER IATGLGLPDH ARMLLGLAPL DLAFPTDDHD
EEHRQQAEEL RTRIEAAATV DATTVQILAT DTNNLRLLDR RLGGLAIADK MRAQISQIER
VHRHAVRPGI RAQLAHVLSE TAALAGWQAL DRCALADAWD YHETAISAAR EADDPALLAY
ARGQQAYVLI DLGRPAEAAE LLHHVRHTYD RRVPGHLRTW LAAAEAEAAA ILGDEATTRT
ALDQAATLLP KEDADPSLPY VALNAHHLAR WRGNCLVRFG DPETIEDLRS ALAGMDGTFN
RAEAGLRCDL AHALLARGEA EAAQPHLYRA EHLAMMIGSR RHGRRIAELK RAVTRALR