Gene Tbis_0220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_0220 
Symbol 
ID9166696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp261732 
End bp264440 
Gene Length2709 bp 
Protein Length902 aa 
Translation table11 
GC content73% 
IMG OID 
ProductDEAD/DEAH box helicase domain-containing protein 
Protein accessionYP_003650845 
Protein GI296268213 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAACT GGAAACCAGT GACTGCCATT TCTTCACGTC AAGGGGGAGC CGGCGAGCTG 
CTCGGCCGCC TGCTCGCGGT CCCGGCACGC CGCGGGCTCG TCACCCATGT GGAGCATGTT
CCCGCACGTG AAGGCGGGGA CGCGCGGTGG CCGGACTGGG TTCCCGAGCC CTTGGTCGGC
CGGCTGCGCC ACCTGGGCAT CAGCGGCCTC TGGGAGCACC AGCTCGCCAC CGCGGAGCAC
GTCCGTCGCG GCGAAAACGT GATCATCGCC ACTGGCACGG CGTCCGGGAA GTCCCTCGCC
TACCTGGTGC CGGCGATCAC CGAGATCTTC GCCGGCGGCA CCGTGCTCTA TCTCACCCCG
ACGAAGGCGC TCGCCGCCGA CCAGCTCGCC ACGATCCGGA AACTGCGGCT CACCGAGGTG
CGCGCGGCCA CCTATGACGG GGACACCCCG CCCGAGGAGC GGAGCTGGGT CCGCCGGCAC
GCGAACTACG TGCTGACGAA TCCGGACATG CTGCACCGCT CGATCCTGCC GCGGCACGGA
TCGTGGGCCT CCTTCTGGCG CAGGCTCCGG CTGGTGGTCG TGGACGAGTG CCACGGCTAT
CGGGGTGTCT TCGGCTCCCA TGTCGCGCAG ATCCTCCGCC GGCTCCGCCG GGTCTGCGCG
AAGTACGGCT CCCGCCCGGT GTTCCTGCTC GCCTCGGCCA CGGCGAGCGA CCCGGGTGCG
GCGGGGAAGC GGCTCACCGG CCTCGACATG GCGGAGGTGA CCGCGGACGC CTCCCCGCGG
GGAGCGATGA CCTTCGCCCT GTGGGAGCCG CCGCTCACCG AGCTGCGCGG GGAGCGGGGC
GCCCCGATCC GGCGCACCGC CACGGCCGAG GCCGCCGACC TGCTCACCGA TCTCGTGGTG
GAGGGCGTCC GCACGCTGGT GTTCGTCCGC TCCCGGCGCG GCGCGGAGAC CGTGGCCCTC
ACCGCGAAGC GGCATCTCAC GGAGCTGGAG GCCGTCCTCG AGGCCGGGCC GTACGGCACG
GCACTCTCGG CCGGAGCGAC CGGAACGGCT GGCCCGGTGG GATCGGCCGG CGCGGCGGGG
TCGCCTGGCC CGGCGGGCTC CGGGGCCGCG TCCGGATCCG GCGGTACGAC GGCTGTGGGC
GAGGTGGGCG AGGATCCCGC GGGCGCGGCC ACGACACCGG CCGGTTCGCC GGCAGTCGGC
GATCACAAAG AGGCGGCGTC CGGTGACCGG AGAGGGACAT CGGCCAGGGG AGATGGCGCG
ACGACCGCCG ATGGCCATGG AGGGACGACG ACCGGTAGGC CGGGAGACAC GACGACCGGT
GGCCCGGGAG ACACGACGAC CGGAGACCAC GGTGCCGGGC CGGCCGGGGG ACGGCTCGCG
GACCGCGTGG CGGCGTACCG GGGCGGCTAC CTCGCCGAGG ATCGGCGGCT GCTGGAGAAG
GCGCTGCGCA CCGGGGAGCT GACCGCGCTC GCGACCACCA ACGCCCTCGA GCTCGGCGTG
GACATCTCGG GCCTCGACGC GGTGATCATC GCGGGCTGGC CGGGCACCCG CGCCTCGCTC
TGGCAGCAGG CGGGCCGGGC GGGCCGGACC GGTCAGGACG CGCTCGTGGT CCTGATCGCC
CGTGACGATC CGCTCGACAC CTACATCGTC CACCACCCGG AGGCGGTCTT CGGGCAGCCG
GTCGAGGCGA TCGTCCTCGA CCCCGACAAC CCCTACGTGC TCGCGCCTCA CCTGTGCGCC
GCGGCCGCGG AGATCCCGTT GACCGAGGAC GACCTGGAGA TCTTCGGCCC GGCGGCGCGC
GATGTGGTCG ACGACCTGGT CCGCCGCGGC ATGCTGCGGC AGCGGCCGAG CGGGTGGTAC
TGGACCCACC GGGAACGCGC CGCCGACCTC GCCGACATCC GCGGTTCGGG CGGGAACCCG
ATCCACGTGG TGGAGTCCGG GACCGGGCGG CTCCTCGGCA CGGTGGACGA GCCGTCGGCG
CACACCACCG TGCATCCGGG CGCCGTCTAC CTCCACCAGG GGGAGACCTA CGAGGTGGAG
TCCCTCGACC TCGAGGCCGG GGTGGCCCTG GTGAGCCCGG CCGACCCCGA CTACGCGACC
TACCCACGGG ACGTGACCGA CATCCGGATG ATCGAGTCGC TCCGGTCCCG GCCCTTCGGC
CCGGGGGAGC TCCACTTCGG GACCGTCGAG GTGACCCGGC AGGTCGTCTC CTACCTCAAG
CGGCGCACCC AGACGGGCGA GGTCCTCGGC GAAGAGCCAC TGGATCTGCC CCCGCGCACG
CTCTGCACCC GCGCGGTCTG GTGGACCCTG CCCGACACCG CCCTCGCCCC GTTGCGCTCG
GCCGAGCACG GCGGGCCGGT CGATCTGGGC GGCGCCGCCC ACGCCGCCGA GCACGCCTCC
ATCGGGCTGC TGCCGCTCTT CGCGACCTGC GACCGCTGGG ACATCGGCGG CGTGTCGACC
GAACTCCATC CCGACACGGG CATGCTCACC GTGTTCGTCT ACGACGGTCA TGACGGGGGT
GCGGGCTTCG CCGAGCGGGG TTTCGCCCGG GCCGCCGATT GGCTCACCGC GACCCGCGAG
GCGATCGCCT CCTGCGAGTG CGAGCGGGGC TGCCCATCGT GCATCCAGTC CCCCAAGTGC
GGAAACGGCA ACGAGCCATT GGACAAGACC GGTGCCATCC GGCTCCTCGA CGTGCTGCTC
GGTTCCTGA
 
Protein sequence
MPNWKPVTAI SSRQGGAGEL LGRLLAVPAR RGLVTHVEHV PAREGGDARW PDWVPEPLVG 
RLRHLGISGL WEHQLATAEH VRRGENVIIA TGTASGKSLA YLVPAITEIF AGGTVLYLTP
TKALAADQLA TIRKLRLTEV RAATYDGDTP PEERSWVRRH ANYVLTNPDM LHRSILPRHG
SWASFWRRLR LVVVDECHGY RGVFGSHVAQ ILRRLRRVCA KYGSRPVFLL ASATASDPGA
AGKRLTGLDM AEVTADASPR GAMTFALWEP PLTELRGERG APIRRTATAE AADLLTDLVV
EGVRTLVFVR SRRGAETVAL TAKRHLTELE AVLEAGPYGT ALSAGATGTA GPVGSAGAAG
SPGPAGSGAA SGSGGTTAVG EVGEDPAGAA TTPAGSPAVG DHKEAASGDR RGTSARGDGA
TTADGHGGTT TGRPGDTTTG GPGDTTTGDH GAGPAGGRLA DRVAAYRGGY LAEDRRLLEK
ALRTGELTAL ATTNALELGV DISGLDAVII AGWPGTRASL WQQAGRAGRT GQDALVVLIA
RDDPLDTYIV HHPEAVFGQP VEAIVLDPDN PYVLAPHLCA AAAEIPLTED DLEIFGPAAR
DVVDDLVRRG MLRQRPSGWY WTHRERAADL ADIRGSGGNP IHVVESGTGR LLGTVDEPSA
HTTVHPGAVY LHQGETYEVE SLDLEAGVAL VSPADPDYAT YPRDVTDIRM IESLRSRPFG
PGELHFGTVE VTRQVVSYLK RRTQTGEVLG EEPLDLPPRT LCTRAVWWTL PDTALAPLRS
AEHGGPVDLG GAAHAAEHAS IGLLPLFATC DRWDIGGVST ELHPDTGMLT VFVYDGHDGG
AGFAERGFAR AADWLTATRE AIASCECERG CPSCIQSPKC GNGNEPLDKT GAIRLLDVLL
GS