Gene Tbis_0179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_0179 
Symbol 
ID9166654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp212563 
End bp213252 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content65% 
IMG OID 
ProductSNARE associated Golgi protein-related protein 
Protein accessionYP_003650804 
Protein GI296268172 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.843652 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGTGC TCTTGAACCT TCTTGACCCC AAATGGTGGC TGAGCATGCT CGGCGCCTTC 
GCCACCATCG GGGTCATCGC CATGATCTTC GCGGAGACCG GGCTGCTCGT GGGCTTCTTC
CTGCCCGGCG ACTCGCTGCT GGTCTGCGCC GGGATCTTCT GCACGGCCTC CGCGGCGCAG
GCCTTCGGGA TCCCACCGCT GAACCTGACC GCGCTGCTCA TCGGAACCCC GCTCGCCGCG
ATCTGCGGTG CCCAGCTCGG GCACTACCTC GGGGCGAAAG TGGGGCGCAA ACTCTTCGAA
CGGCCGGATT CCCGGTTCTT CAAGCAGGAG CACGTCCGGA AGGCCGAGTA CTACTTCAAC
AAGTTCGGCC CGGCCAAGGC GGTGATCATC GCCCGGTTCA TGCCGATCGT CCGCACGTTC
ATGAACCCGG TCGCCGGCGT CCTGGAGATG GACGCGAGAA AGTTTTTCGT GTGGAACGTG
GCCGGCGGCA TTTTGTGGGT CGAATCGATG GTGCTGCTCG GATACTTCCT CGGCTCCAAG
GTGGAGAACA TCGATCGGTT CGTCCTCCCC GGCGCCATTG TGATCATCAT TCTCTCGGTG
CTGCCGATCG TTCGCGAGGT GCTCAAGGAG CGCCGGGCCG CCCGGATGGC CGCGCCGCGG
GGCCGGCACG CCCGGCAGCG CATTCAGTAA
 
Protein sequence
MDVLLNLLDP KWWLSMLGAF ATIGVIAMIF AETGLLVGFF LPGDSLLVCA GIFCTASAAQ 
AFGIPPLNLT ALLIGTPLAA ICGAQLGHYL GAKVGRKLFE RPDSRFFKQE HVRKAEYYFN
KFGPAKAVII ARFMPIVRTF MNPVAGVLEM DARKFFVWNV AGGILWVESM VLLGYFLGSK
VENIDRFVLP GAIVIIILSV LPIVREVLKE RRAARMAAPR GRHARQRIQ