Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_4181 |
Symbol | |
ID | 9158369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 4304235 |
End bp | 4305818 |
Gene Length | 1584 bp |
Protein Length | 527 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_003649089 |
Protein GI | 296141846 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCGCCG AAGAGAACAT CGCCTGGTAT CCCCGTACCG AGGAGCCCCG CAGCTCCCAG CGCAATACCT GGAACAATCA AATCCGCAAT CACGCCGTCA TGCGAGGCGA TCAGACCGCG CTGCGGTACC TCGACAAGGA GGTCTCCTGG GGACGGTTCG CCGAGCGGGT CGGCGCCTTC GCCGGAGCGC TAGCCAAGCG CGGGATCACG GCGGGCGACC GGGTGCTGAT TCTCGGCCTA AACCGGATCG AGTACGTCGA GGCGGCGCTC GGTGTGACGG CGCTCGGCGG CATCGCGGTC CCGGTCAACT TCCGCATGGC GCCGCCCGAG GTCGCGTATC TCGTCCAGGA CACGAAGTGC AGCGCGGTCA TCTACGAGGC GCCGTTCGAC CCCCTGGTGG CGGGAGTGGC GGGAGCCGGG GCCGACTTCG GCCTCCGCAT CCGGTTCGAC GGTGCGGACG AGGCCGCGGG GGCGGTCGGT TTCGAGGACC TGATCGCCGA AGGCAACCCC GATCCCCACG TCGACGTGCC CGAGGATTCA CCGGCGCTCA TCATGTACAC CTCGGGGACC ACCGGCCGGC CGAAGGGCGC GGTGCTCACC CACATCAACA TGACGGCCCA GGGCTGGACC AATCTGGTCG CGCCCGGCTC CGTCGATCCC GAAGCGGTGG GCGCGATCGC GGTCCCGATG TTCCACATCG CCGGCTTCGG CGTGCTCGCC ACCGCCTTCC TGCAGGGCCT GACCTCGGTG ATCTTCCCGC TCGGAGCGTT CGACCCGGCG CAGACGCTCG ATGCGCTGGA GCGCGAGGGC ATCACCAGCA TGTTCATGGT GCCCATGCAG TGGCAGCTCG CTGTCGCCGA GCAGAAGGCC CGGCCGCGCA ACCTCAAGCT GCGCTATGTC TGGTGGGGCG CCGCTCCCGC GAGCGAGACT CTGCTGCGGG AGCTGACCGC CACCTTCCCC GACGCCGAGA TCTGCGCCGT CTTCGGCCAG ACCGAGATGT CGCCGGTCAC CTGTGCACTC TCGGGCGCTG ACACGCTGCG CAAGTTCGGG TCCGTGGGCA AGGTGGTCCG GACGGTGGCC GCGCGCGTGA TCGACCCGGA CGGCAACGAC GTGCCGCGGG GCCAGATCGG CGAGATCGTC TACCGCGGAC CCAATATGAT GTCGGGCTAC TGGAACAACC TCGAAGCCAC GCGCGAGGCC TTCGCGGGCG GCTGGTTCCA CTCGGGCGAT CTCGTGCGGA TGGACGAGGA GGGGTTCGTC TACGTGGTCG ACCGCGCCAA GGACATGATC ATCTCCGGCG GCGAGAACAT CTACTCCCAG GAGGTGGAGA ACGCCGTCGC CGCGCACCCC GATGTCACCG AGGTCGCCGT CATCGGCAAG CCCGACGAGA AATGGGGTGA GGCCGTGGTC GCGGTGGTGC AGCTGCGCGA GGGTGCTGAG CTGACGGTGG ACACCCTGTC CGCCTTCCTC ACCGATCACA TCGCCCGGTA CAAGCATCCG CGGCATGTGG TGGTGATCGA CGCCCTGCCC CGCAACCCCA CGGGCAAGGT CACCAAACCC ACTCTGCGCC AGCAGTTCGG CTGA
|
Protein sequence | MTAEENIAWY PRTEEPRSSQ RNTWNNQIRN HAVMRGDQTA LRYLDKEVSW GRFAERVGAF AGALAKRGIT AGDRVLILGL NRIEYVEAAL GVTALGGIAV PVNFRMAPPE VAYLVQDTKC SAVIYEAPFD PLVAGVAGAG ADFGLRIRFD GADEAAGAVG FEDLIAEGNP DPHVDVPEDS PALIMYTSGT TGRPKGAVLT HINMTAQGWT NLVAPGSVDP EAVGAIAVPM FHIAGFGVLA TAFLQGLTSV IFPLGAFDPA QTLDALEREG ITSMFMVPMQ WQLAVAEQKA RPRNLKLRYV WWGAAPASET LLRELTATFP DAEICAVFGQ TEMSPVTCAL SGADTLRKFG SVGKVVRTVA ARVIDPDGND VPRGQIGEIV YRGPNMMSGY WNNLEATREA FAGGWFHSGD LVRMDEEGFV YVVDRAKDMI ISGGENIYSQ EVENAVAAHP DVTEVAVIGK PDEKWGEAVV AVVQLREGAE LTVDTLSAFL TDHIARYKHP RHVVVIDALP RNPTGKVTKP TLRQQFG
|
| |