Gene Tpau_4147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_4147 
Symbol 
ID9158335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp4276770 
End bp4277915 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content70% 
IMG OID 
ProductGAF sensor signal transduction histidine kinase 
Protein accessionYP_003649055 
Protein GI296141812 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGGGC AGTCCGACCG CGCCGGCCTG CAGGACATCC TCAGCGCCGT TCTCGCGGTG 
GCGCAGGGAC TCGATCTACC GAGCACGCTG CGCCGCATCG TGACCTCGGC GATGGCGCTG
GTGGACGCCC GGTACGGCGC AGTGGGCGTG AGCAACGACG ACGGTTCGCT GCAGGAGTTC
ATCTACGTGG GAGTCGACGC CGAGACGGCC GCCCGAATCG GCGATCCGCC GTGCGGCCGA
GGCGTTCTGG GATATCTGCT GCGCGTCAAC GAGCCGTTGC GGCTCGATGA GTTGTCCGCT
CATCCCGCGT CGGTGGGCTT CCCGCCGAAC CATCCGCCCA TGCACACCTT CCTGGGCGCG
CCGATCATCG TCAACGACGA CCTGTTCGGC TGCATCTACC TCTCGGAGAA GGCCGACGGT
CGTGCGTTCA CGGCGGACGA TGCGCAAGCG ATCGAGGTGT TCGCAGCCGC CTCCGCGGTG
GCGATCGACA ACGCGCAGAT GCATACCGCC GCGCTGGCGC AGCAGGAGCG GGTGGGCGAA
CTGCAGGTGA TCGAGGAGCG TGAGCGGATC GGCCGTGACC TGCACGATCA CGTGATCCAG
CGGATCTTCG CGGCCGGTCT CGGGCTGCAG GTAGCACGCT CCGCGGCGGC CGACGAACCG
GTGCGCGAGC GGCTCGATGC CGCGATCGGC GAGCTGGACC GCACCATCGC CGATATCCGC
TCCACCATCT TCGAGTTGTC CGATCACGGA ACCGAACTGC GCGCACGGCT GGTGCGGGCC
ACCCGGTCGG TGGCGCACGG TGGCGAGCTC GCGATGGACA TCGGATTCTC CGGCCCGGTG
GAGAGCGCCG TCTCCGACGA TCTGGGGCGC GATCTGGAGG CCGTGATCAG TGAGAGCGTC
TCCAATGCCG TGCGGCACAG CGGCGGAAGC CGGGTTGCGG TCACGGTGGT GGCGGGCGGG
GAGTCCGTTG CCGTCGAGGT GGCCGACGAC GGTGTCGGCA CGCCCGTCGA TGGTCGGCGC
AGCGGTCTGC GGAATCTGGC GACCCGGGCC GAGCTGCGGG GCGGATGGTT CGAGGTGCGA
CCCGCCGATC CCGGTGCCGA ACGCCCGGGG ACGGTGCTGC GGTGGGAGGT ACCGCGGTCG
GGTTAG
 
Protein sequence
MTGQSDRAGL QDILSAVLAV AQGLDLPSTL RRIVTSAMAL VDARYGAVGV SNDDGSLQEF 
IYVGVDAETA ARIGDPPCGR GVLGYLLRVN EPLRLDELSA HPASVGFPPN HPPMHTFLGA
PIIVNDDLFG CIYLSEKADG RAFTADDAQA IEVFAAASAV AIDNAQMHTA ALAQQERVGE
LQVIEERERI GRDLHDHVIQ RIFAAGLGLQ VARSAAADEP VRERLDAAIG ELDRTIADIR
STIFELSDHG TELRARLVRA TRSVAHGGEL AMDIGFSGPV ESAVSDDLGR DLEAVISESV
SNAVRHSGGS RVAVTVVAGG ESVAVEVADD GVGTPVDGRR SGLRNLATRA ELRGGWFEVR
PADPGAERPG TVLRWEVPRS G