Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_4145 |
Symbol | |
ID | 9158333 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 4275779 |
End bp | 4276429 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_003649053 |
Protein GI | 296141810 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCACCG TCTTCCTCGT CGACGATCAT GAGATCGTGC GCAGGGGCCT GGCTGATCTG CTGACCTCGG ACGGGCGGCA TCGTGTGGTC GGGGAGGCGG CGACGGTGCG CGAGGCCCTG GCACGGATCC CGGCGGTCGC TCCTCAGGTC GCGGTGGTGG ACGTGCGGCT GCCCGACGGG TCCGGAATCG ATCTGATCCG CACCCTGCGT GATCAGCACC CGCGGCTGCC CTGTCTGGTA CTCACCTCGT ACTCGGACGA CGAGGCATTG CTCGACGCGA TCACGGCGGG CGCGCAGGGC TACGTGCTCA AACAGATCCG CGGCACCGAG TTGGTCTCGG CGATCGCCAC CGTCGCCGCC GGCGGATCGC TTCTCGATTC CGCGAGCACC GCCCGTGTGC TGCAACGCAT CCGCGATGCG GATCGGGTGC CATCGCTGGC CCAGGCGGGG CTGACCGGAC AGGAGGAAGC GGTCCTGGAA CTGCTCGGCG AGGGGCTGAC CAATAAGCAG ATCGCCGAGC GGATGTTCCT GGCGGAGAAA ACCGTCCGCA ACCACGTGAC CGGCGTACTG GCGAAGCTGG GCGTGGAGAA CCGGGTGCAG GCCGCGCTGC GCGCAGTGCA GTGGCGCGAG GCCCGCAGGA CTCGGCCGTG A
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Protein sequence | MATVFLVDDH EIVRRGLADL LTSDGRHRVV GEAATVREAL ARIPAVAPQV AVVDVRLPDG SGIDLIRTLR DQHPRLPCLV LTSYSDDEAL LDAITAGAQG YVLKQIRGTE LVSAIATVAA GGSLLDSAST ARVLQRIRDA DRVPSLAQAG LTGQEEAVLE LLGEGLTNKQ IAERMFLAEK TVRNHVTGVL AKLGVENRVQ AALRAVQWRE ARRTRP
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