Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_4079 |
Symbol | |
ID | 9158266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 4205087 |
End bp | 4206052 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003648988 |
Protein GI | 296141745 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0276978 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACACCG TGGCCGTCCT GCTGTTGGAA CCGATCGTCG GATTCGATGC GGCAATCCCT CCGCTGTGCT TTTCGGAGGC GAAAACCGAA GCGGGACAGC CGCTGTACCG AGTGATCACA TGCGGGCTCG ACCGCAACCC GGTCGCCGCG ACCGGCGGCT ACGCGGTGAC CCCCGAAGCC GGACCCGAGG TGCTCCCGTT CGCCGATACC GTCATCATCC CCGGCACCAA GATCCCGGGA CCGCGCACCG ACGGCACACT GCCCGACGAG GTCCGCGCCG CGCTTCGCAG CATTCGTCCC GGCACCCGCA TCGTCTCCAT CTGCACCGGT GCCTTCGTCC TCGCCGCCGC CGGGCTGCTC GACGGCCGGT CGGTCACCAC GCATTGGAAG TACGGAGCGC ACTTACACAG GATGTACCCG CGCGTCGGGC TCGTCGACCA CGTGCTGTTC ACCGACGACG GTGACGTGCT CACCTCCGCC GGCCTGGCCG CGGGACTCGA CTTGTGCCTG CACCTGATCC GGAAGGACCA CGGTGCCGCC ATGGCCAACA AGGTGGCCCG GTACTGCGTG ATCCCGCCCG GTCGCGAGGG CACCCAGGCG CAGTTCGTCG ACGTGCCCGT GCCCGCGAGC GGTGCGGGAA GCACCGTCGC CGTGCGGGAG TGGGCGCAGC AGCATCTGGA CGAGAATCTG GCAGTCGACC AGCTCGCCCG CCGCGCCGGC CTCTCCGTAC GCACTTTCAA CCGGCGCTTC CGGGAGGAGA CCGGCGAGAC CCCGGGCGCG TGGATCCTGC GCCGTCGCCT CGACCGAGCA CGCCTCCTGC TGGAGACCTC CGACCTCTCC GTCGACGCCG TCGCCCGCGA CTCAGGGCTC GGCACCGGCG CGAGTCTTCG TGCCCATCTG CGCCGCGACA CCGGAATGAC TCCGCTCGGC TACCGCCGCG TCTTCCAGGA GGCCCCGGGG GCCTGA
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Protein sequence | MHTVAVLLLE PIVGFDAAIP PLCFSEAKTE AGQPLYRVIT CGLDRNPVAA TGGYAVTPEA GPEVLPFADT VIIPGTKIPG PRTDGTLPDE VRAALRSIRP GTRIVSICTG AFVLAAAGLL DGRSVTTHWK YGAHLHRMYP RVGLVDHVLF TDDGDVLTSA GLAAGLDLCL HLIRKDHGAA MANKVARYCV IPPGREGTQA QFVDVPVPAS GAGSTVAVRE WAQQHLDENL AVDQLARRAG LSVRTFNRRF REETGETPGA WILRRRLDRA RLLLETSDLS VDAVARDSGL GTGASLRAHL RRDTGMTPLG YRRVFQEAPG A
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