Gene Tpau_4079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_4079 
Symbol 
ID9158266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp4205087 
End bp4206052 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content70% 
IMG OID 
Producttranscriptional regulator, AraC family 
Protein accessionYP_003648988 
Protein GI296141745 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0276978 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACACCG TGGCCGTCCT GCTGTTGGAA CCGATCGTCG GATTCGATGC GGCAATCCCT 
CCGCTGTGCT TTTCGGAGGC GAAAACCGAA GCGGGACAGC CGCTGTACCG AGTGATCACA
TGCGGGCTCG ACCGCAACCC GGTCGCCGCG ACCGGCGGCT ACGCGGTGAC CCCCGAAGCC
GGACCCGAGG TGCTCCCGTT CGCCGATACC GTCATCATCC CCGGCACCAA GATCCCGGGA
CCGCGCACCG ACGGCACACT GCCCGACGAG GTCCGCGCCG CGCTTCGCAG CATTCGTCCC
GGCACCCGCA TCGTCTCCAT CTGCACCGGT GCCTTCGTCC TCGCCGCCGC CGGGCTGCTC
GACGGCCGGT CGGTCACCAC GCATTGGAAG TACGGAGCGC ACTTACACAG GATGTACCCG
CGCGTCGGGC TCGTCGACCA CGTGCTGTTC ACCGACGACG GTGACGTGCT CACCTCCGCC
GGCCTGGCCG CGGGACTCGA CTTGTGCCTG CACCTGATCC GGAAGGACCA CGGTGCCGCC
ATGGCCAACA AGGTGGCCCG GTACTGCGTG ATCCCGCCCG GTCGCGAGGG CACCCAGGCG
CAGTTCGTCG ACGTGCCCGT GCCCGCGAGC GGTGCGGGAA GCACCGTCGC CGTGCGGGAG
TGGGCGCAGC AGCATCTGGA CGAGAATCTG GCAGTCGACC AGCTCGCCCG CCGCGCCGGC
CTCTCCGTAC GCACTTTCAA CCGGCGCTTC CGGGAGGAGA CCGGCGAGAC CCCGGGCGCG
TGGATCCTGC GCCGTCGCCT CGACCGAGCA CGCCTCCTGC TGGAGACCTC CGACCTCTCC
GTCGACGCCG TCGCCCGCGA CTCAGGGCTC GGCACCGGCG CGAGTCTTCG TGCCCATCTG
CGCCGCGACA CCGGAATGAC TCCGCTCGGC TACCGCCGCG TCTTCCAGGA GGCCCCGGGG
GCCTGA
 
Protein sequence
MHTVAVLLLE PIVGFDAAIP PLCFSEAKTE AGQPLYRVIT CGLDRNPVAA TGGYAVTPEA 
GPEVLPFADT VIIPGTKIPG PRTDGTLPDE VRAALRSIRP GTRIVSICTG AFVLAAAGLL
DGRSVTTHWK YGAHLHRMYP RVGLVDHVLF TDDGDVLTSA GLAAGLDLCL HLIRKDHGAA
MANKVARYCV IPPGREGTQA QFVDVPVPAS GAGSTVAVRE WAQQHLDENL AVDQLARRAG
LSVRTFNRRF REETGETPGA WILRRRLDRA RLLLETSDLS VDAVARDSGL GTGASLRAHL
RRDTGMTPLG YRRVFQEAPG A