Gene Tpau_4072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_4072 
Symbol 
ID9158259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp4198370 
End bp4199722 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content67% 
IMG OID 
Productpermease for cytosine/purines uracil thiamine allantoin 
Protein accessionYP_003648981 
Protein GI296141738 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCGCT ACTACCGGCG CCTCGACGCG CACCTGCACG CTGGAGCCGA CGACGGTACC 
CCCGTGACCG GCGACCTCAG TGGTCGCCGC ATCTTCGCGA TCTGGCTCGC GGCGAACCTC
GTGGTGACCA CGATGCTCAC CGGCACACTG TTCGTCCCCT CGGTGTCGCT GAGCAGTGCG
CTGTGGTTGA TCCTGGCCGG CACGGTGGTC GGCGCCCTGG TGCTGGTGAC CGTCGGTAAC
GTGGGCACCC GCACCGGGCT TCCCACGATG GCGCTCACCC GCGCCTCGTT CGGGGTGCGT
GGCAGCCGGA TTCCCGTGGC CGCCAACATC GCCGTGCTCA TGGGCTGGAG CTGGGTGCAG
GCCATGCTGG CCGGTGTCAC GGTGAATTAC GTGGTGGCGC AGCAGACCGG GTACTCGAAC
CCGACACTGT TCTCCGTGCT GTGCGAGGTG ATCGTGGTCT CTCTCGCGAT CTTCGGGCAC
ACCGGTATCG CCAAAGTGGA ACCTATTCTG GCTGTGGTGA TCCTGGGCAT CATGGCCTAT
CTGTTCATCG ATATGTTCGG TGACGGATTC GCCCGCCTCG ACACCCTGCC GCGCGACCCC
GAAGGACTCA CCGGGCTCGG CATTTTCGAC ATCGTCGTGG CCACCGCCAT CTCCTGGACC
GTGCTCTCCG CCGATATCAA CCGTTTCGCC GCCACCTCTC GCGGCGGCGT CGTGGGATCC
GGGCTCGGTT ATGTGGCGTC CACGGTGGCC GCGATGGCGT TGGGCGCCAC CGCGATCGCG
TGGCTGCTCG CGGGTGGCAA GGAAGCGCCG CCGTTCGATC CGACGGTGAT CGTCGCCGAA
TTCGGCGTGC CACTGGCGAT CGTGGTGTTC TTCTCCGTGA TGGCCACCAA CACCATGGCC
GTCTACGGGA TGGTCACCTC GCTGGTGAAC GCGGAGCCCG GACGCATCCG GTTCCTGCCC
GCCGCCCTCG GACTCGGCGT GATCTCGATC GCCGGATCGG CATGGCTGGC GCTGCTGGAC
AAGTTCACCG CGTTCCTGAC CGCCATCGGA ATCGTCTTCA TCCCGGTTTT CGCCGTCATC
ATCGTGGACT TCTACGTGCT CCGGCGTGGC CGCTACGCCG CGTCGCTCGC GGAAGCGGGT
TCGCGGGATT ACTGGTACCG CGGCGGCTGG AATCCGGTGG CGGTCATCGT ATGGCTGGTG
GGTGTCGGAT TCTCGTCGGC GATCACTTAC CTGTGGGTGA GCCCCGTGGG AGCCACCGTG
CCCACCTTCC TGGTGAGCGC GGGGCTGTAC TGGGCCGCGA GCGTCGCCGT CCGGAACCGC
GATCACCGCG ATACCGATAG CGTGGCCGTG TGA
 
Protein sequence
MLRYYRRLDA HLHAGADDGT PVTGDLSGRR IFAIWLAANL VVTTMLTGTL FVPSVSLSSA 
LWLILAGTVV GALVLVTVGN VGTRTGLPTM ALTRASFGVR GSRIPVAANI AVLMGWSWVQ
AMLAGVTVNY VVAQQTGYSN PTLFSVLCEV IVVSLAIFGH TGIAKVEPIL AVVILGIMAY
LFIDMFGDGF ARLDTLPRDP EGLTGLGIFD IVVATAISWT VLSADINRFA ATSRGGVVGS
GLGYVASTVA AMALGATAIA WLLAGGKEAP PFDPTVIVAE FGVPLAIVVF FSVMATNTMA
VYGMVTSLVN AEPGRIRFLP AALGLGVISI AGSAWLALLD KFTAFLTAIG IVFIPVFAVI
IVDFYVLRRG RYAASLAEAG SRDYWYRGGW NPVAVIVWLV GVGFSSAITY LWVSPVGATV
PTFLVSAGLY WAASVAVRNR DHRDTDSVAV