Gene Tpau_4064 details

Gene Information

• Locus tag: Tpau_4064
• ID: 9158251
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 4194422
• End bp: 4194982
• Gene Length: 561 bp
• Protein Length: 186 aa
• Translation table: 11
• GC content: 69%
• Product: RNA polymerase, sigma-24 subunit, ECF subfamily
• Protein accession: YP_003648973
• Protein GI: 296141730

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAACGACC CGGGGCTGTT GTCGTCGCTC TCCGACGAGA CTTTGATCAG GCGGGCGCAG 
CGCGGTGACG CCGCCGCATT CGATGCGCTC GTGCAAAGGC ATGCGCCGGC GATGTACCGG 
TTCGTCGCTC GCACCCTCTC TGAGCGCACC GATTGCGATG ACGTCGTGCA GGAGTCGCTC 
ATCGCGGCGT GGAAGGCGCT CCCGACGTTT GCATTCCGGT CGACTGTCCG CACCTGGCTG 
TTCTCCATCG CCTCCCGCAA GACCATCGAC GTGCTGCGAC GGCGCAAGGG CATGGTGCTG 
TCAGAGGCGG TCCAGGAGGT CGCGACCACC GAGCCCGGCC CCGTCGAACA GGTCGCCGAT 
AGCGACTTCC TGGACGCGCT CAGCCGCGAG CTCGCACGGC TGCCGTATCC GGCGCGCGCG 
GCCTGGTGGT TGCGCGAGGT GGACGGGCTC TCGACCACCG AGATCGCGGC GGTGTTGCGC 
ACCACGGAGG GGTCCGTTCG GGGGCACCTC CAGCGCACCC GTCGCCGCCT CGCCGAGGCG 
CTGGAGGGAT ACCGACCATG A 

 

Protein sequence

MNDPGLLSSL SDETLIRRAQ RGDAAAFDAL VQRHAPAMYR FVARTLSERT DCDDVVQESL 
IAAWKALPTF AFRSTVRTWL FSIASRKTID VLRRRKGMVL SEAVQEVATT EPGPVEQVAD 
SDFLDALSRE LARLPYPARA AWWLREVDGL STTEIAAVLR TTEGSVRGHL QRTRRRLAEA 
LEGYRP