Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_4042 |
Symbol | |
ID | 9158226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 4172041 |
End bp | 4172898 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | Glutamate--tRNA ligase |
Protein accession | YP_003648952 |
Protein GI | 296141709 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACGGCCG GACGCTATGC ACCGAGCCCC TCGGGCGATC TGCATGTGGG GAATCTGCGA ACCGCACTGC TCGCGTGGCT GTTCGCCCGC TCGACGGGCC GCGAATTCCT CATGCGGGTC GAAGATCTCG ATACCGGACG GACGGTCGAC GGTGCCCAAG CACGTCAGTT GGCCGACCTC GCCTCGCTGG GACTCGATTG GGACGGTCCC GTCGTCCGGC AGTCCTCGAG AACCCGGATG TACGCGGATG CGCTGGAGCG ACTCGATGTG TACGAGTGCT ATTGCACCCG CCGCGAGATC CTCTCGGCAC CTTCCGCCCC GCACACCCCC GACGGCGCCT ATCCCGGCAC CTGCCGTGAC CTCACCGAGG CGGAGCGCGT GGAGCGGCGG GCGGCCCGCC CGGCGGCCCT GCGGCTGCGT TCGACGGTGC GCTCGTTCAC CGTGCACGAC GAGTTGCACG GTCAATACAC CGGCGTGGTC GACGATTTCG TGCTGCGACG CGGAGACGGC ACGTACGCCT ACAACCTCGC CGTGGTGGTC GACGATGCCG CCCAGGGCAT CGATCAGGTG GTGCGCGGCG ACGATCTGCT CTCCTCCGCT CCGCGGCAGG CCTACCTCAC CGAGTTGCTC GGCGGTACCG CACCCCGGTA CGCGCATGTG CCGATGGTCT TGGGCCCCAC CGGTGTCCGG CTCGCCAAAC GGGACGGTGC CGTCACCCTC ATCGAGCGCG GAGGGCCACA GGTGGTGCTG CCGGAGCTGG CCGCCAGCCT GGGACTGGCC GGGTCGACCC CGACCGACAT GCTCGACGGC TTCGATCCGG CGCGGCTCCC CCGCGAGCCC TGGACGCTTC CGCTCTGA
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Protein sequence | MTAGRYAPSP SGDLHVGNLR TALLAWLFAR STGREFLMRV EDLDTGRTVD GAQARQLADL ASLGLDWDGP VVRQSSRTRM YADALERLDV YECYCTRREI LSAPSAPHTP DGAYPGTCRD LTEAERVERR AARPAALRLR STVRSFTVHD ELHGQYTGVV DDFVLRRGDG TYAYNLAVVV DDAAQGIDQV VRGDDLLSSA PRQAYLTELL GGTAPRYAHV PMVLGPTGVR LAKRDGAVTL IERGGPQVVL PELAASLGLA GSTPTDMLDG FDPARLPREP WTLPL
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