| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3970 |
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| Symbol | |
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| ID | 9158152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | - |
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| Start bp | 4088224 |
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| End bp | 4089444 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | |
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| Product | putative transcriptional regulator, PucR family |
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| Protein accession | YP_003648880 |
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| Protein GI | 296141637 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00695384 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTGTGA GCCACGCCAT AGGGGAGAGG GTCGTCGCGG ACATCGAGTG CATCCGCGAC
GAGCTGGCGA CCAGGATCGA CGATGTGACC GCGGGTGCCG TCGCCCGTAT CCGTGCCGAC
GTGCCCTTCT ACGCCACCGC CGACATCGTC TCGGATCCAC TGCTCACCGC GACCGTGCGC
GAGAACCTGC TGTTCATCGT GGACGCGCTC ACCGCACCCG CGTTCGATAC CGCCCCCGCC
GAGATCACCG GACGCACCCG CGCCGAGCTC GGGGTGCCCC TTGCCTCGGT GATGCACGCC
TATCGGATCG GCGTGCACCG CGTGTGGGAG GAGGTGATGG CGATCGCCGA CGAGCGTCCC
GAGCTGAGCC GGCAAGCGCT GCTCACCGCG GCCCAGCACA TGTGGCAGGC CCAGGACGCC
TTCGTCGACG CGATGGCGGC CGCGCACCGC GACCGCAGCA CCGAGCAGGT CCTCGACGAC
GCCGCCGAGC GCGCCGCCCT CGCCGAATAC CTGCTACAGG GCCGCATCCC CAGTGATCAG
AGCCTGTGGG AGATCGCGAC CCTGTTGCGG CTGCCCACCA CCGGCCCGTA TCTGGCCGTC
GCCGCGGAGG CCACCGAAAT CGGGCGGCAG CCACTGCCCG GCATCGCCGA CCGGCTGCGC
GCCCTCGACG TGTACTCGGC GTGGCGCCTG CTGCCCGACC AACTGATCGG GATCGTGCAC
GCGCCCACGC CCGACGCCCG ACAGGCCGTC ATCGACCTGC TGCGTCGCGC CGCGACTGGA
CGAGTCGGAG TGAGCGCGCC GTTCGCCGAA CTCCGGGACA CCCCCGCCGG CCTCAACTTC
GCGCGTCGCG AACTCCTCGG ACCGGGCACC GGCGTCTCGG TGTTCGACGG TTCCATGCTC
GGGACCGCCG CCATCGCCGC TCCCGAGGCC ACCGTGGATC TGGCCCGGGG TGTCCTGCAT
GGCCTGTACC GGCTCCCCGT CGACGATCGG GAGCCGCTCC TGGAGACCTT CCGGGCGTGG
GTCGCGCATG ACGGAAACGT CAAGGACGCC GCCGCCGAGC TCTACGTGCA CCCGAACACC
GTGCGGCACC GTTTGCGCCG CGTCGAGCAA CTGACCGGCA GGTCGGTGAA CTCGCCGCGC
GAACTCGCGG AGCTCTGCCT GGCGTTCGAG GTCGACGCCC GAATCGGAAT CGAGAGGGGC
CGCGACTCGC CTACCGGCTG A
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| Protein sequence | MSVSHAIGER VVADIECIRD ELATRIDDVT AGAVARIRAD VPFYATADIV SDPLLTATVR
ENLLFIVDAL TAPAFDTAPA EITGRTRAEL GVPLASVMHA YRIGVHRVWE EVMAIADERP
ELSRQALLTA AQHMWQAQDA FVDAMAAAHR DRSTEQVLDD AAERAALAEY LLQGRIPSDQ
SLWEIATLLR LPTTGPYLAV AAEATEIGRQ PLPGIADRLR ALDVYSAWRL LPDQLIGIVH
APTPDARQAV IDLLRRAATG RVGVSAPFAE LRDTPAGLNF ARRELLGPGT GVSVFDGSML
GTAAIAAPEA TVDLARGVLH GLYRLPVDDR EPLLETFRAW VAHDGNVKDA AAELYVHPNT
VRHRLRRVEQ LTGRSVNSPR ELAELCLAFE VDARIGIERG RDSPTG
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