| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3881 |
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| Symbol | |
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| ID | 9158062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 4005288 |
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| End bp | 4007675 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | Protein of unknown function DUF1998 |
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| Protein accession | YP_003648793 |
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| Protein GI | 296141550 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.911773 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATTCAAG TCCCGGAAAA CGAACATTCC GAGGCTATCG GCAGAGCTTC AGCGTCGGGG
GCAAACGCAT TGGAACACAA CACCTTCGGG CGCGAACTGC TGCATCGGAT CCAAGCCGGA
ACAGGCCCCG CAGGCGATGG ACTGACCCAT GTGGCCGATA TCCCCTCACG ACGAGCCGAA
TTCGCGCAGT GGCCACAGTG GCTGCCGTCG AACATCCGGG ACGGGTTCAT CGAGTCGGGC
GTCGAGCGGC CCTGGCGGCA CCAGATCGAG GCCGCCGAGC ACGCGCACGC CGGGCGACAC
GTGGTGATCT CCACAGGTAC AGCGTCAGGA AAGTCGCTCG CCTATCAGCT TCCCGTACTC
GCCGGCCTGG CTACGGACCC GCGCGCCACC GTGCTCTACC TCTCGCCCAC CAAAGCTCTG
GGCACCGATC AGCACGCCGC CGCGCTACGC CTGACGTCGA TGTTCGACGG CCTGGGCGAC
GTCTCGCCCG CGATGTACGA CGGTGACACC TCGCAGGAGA TGCGCCGCTG GGCACGTTCG
GATAGTCGTT GGGTGTTCAC CAATCCGGAT ATGATCCACG TGGGAATGCT TCCGCGGCAT
GCCAAGTGGG CGCGCTTCCT CCGTGGCTTG AGATACGTGG TGGTGGACGA GTGTCACCAC
TATCGAGGTG TGTTCGGATC GCACACCGCG TTGGTGCTGC GCCGCCTGTT GCGGGTGGCG
GCGAAATACG GCGCCGAACC GACGGTGATC TGTGCTTCGG CGACCACGTC CGATCCGGCT
GGCGCAGCAT CGCGGCTCAT CGGCTCCGAC TGCGTTGCCG TGGAGACCGA TTCGTCGCCG
CATGGACCGC GCACAGTGGT GTTGTGGGAG CCGCCACTGA TCCCGGATCT GGAAGGCGAG
AACGGCGCCC CGGTACGCCG GCAAGCGACC ACCGAGGCGG CGCGGATGAT GGCAGATCTG
GTCGTGGAGG GCGCTCGGAC GCTGGCTTTC GTCCGGTCCC GACGGTCCGC CGAGACCGTC
GCACTCTCCA CCCGGCGCAT GCTCGCCGAG GCCACGCCGG AGCTGGCCTC TCGGGTGGCG
GCGTATCGCG CGGGCTACCT CGCGGAGGAC CGTCGTGCGC TGGAACGAGG CCTGAACGAT
GGTGAGCTGT TGGCGGTTGC GACCACGAAC GCGCTGGAGC TGGGTGTCGA TATCGCGGGC
CTCGATGCCG TGCTCATGGC CGGATTCCCC GGTACGGTCG CCTCGTTCTG GCAGCAGGCC
GGGCGCAGTG GACGACGCGG ACAGGGGTCG CTGATCCTGC TGATCGCCCG CGACGATCCC
CTGGACACCT ACCTGGTGCA CCACCCCGAG TCGCTGCTCG GGCGACCGGT GGAGGCCACC
ATCACCGATC CGTGGAACCC GTATGTGCTG GGGCCGCAGT TGCTCTGCGC CGCCGGCGAA
CTCCCGCTGA CGCGCGAGGA GGTGACCGCG CTGGGTGCGG TCGACGTGGT CGGTCGCCTC
ACCGCCGACG GACTGCTGCG CGAGCGCCCC GCCGGGTACT TCCTGGCCGC CGGTATCGAT
CCCCATGCAC GCGTGAATAT CCGGGGCGGA GCGGGCAGCG AGGTGCTGAT CGTGGAGGAG
CTCACGGGCC GGCTGCTGGG AACGGTGGAT TTCAATCGCG CGCTGTCGAC GGTGTACGAG
GGCGCCGTGC ACGTGCACCA GGGTGAGTCG TACGTGGTGG ACGAGCTCGA CCTCGATGAG
GGGTTGGCGA TGGTGCACGC GGAGGAGCCC GAGTGGACGA CCTCAGCACG CGAAGACTCC
GATGTCCGGG TCACCGGCGT GCACCAGACC GAGGAGCTGG GCGCGGTGAC GGCGCGGTTC
GTCTCGGTCG AGGTGACCAG TCAGGTGGTC GGATACCTCC GCACGCTGCG CACCGGTGAG
GTGCTCGATG CGGTGGAACT GGACCTGCCG GAGACGTCAC TCGCCACCCA GGCGGCGTTG
ATCACGATCG AGCCGGATGC ATTGCTCGCG GCGGGGCTCG CACCCGAGCA CTGGCCGGGC
GCGCTGCACG CTGCAGAGCA CGCGGCGATC GGCCTGCTGC CGCTTGTCGC CTCGTGTGAC
CGGTGGGACA TCGGCGGGCT CTCGACCGCG CAGCACGAGG ACACCGGCCT GCCGTCGATC
TTCGTCTACG ACGGTTACCC CGGCGGGGCC GGATTCGCCG AACGCGGCTA CGAGGCGATC
GCCACCTGGC TCCTGGCCAC CCGTGACGCG GTCGCGGCCT GCGAGTGCCC GGCAGGCTGT
CCCTCCTGCG TGCAGTCTCC CAAGTGCGGC AACGGGAACG ACCCGCTCGA CAAGGCCGGC
GCGATCGTCG TTCTCGACCT CGTCTTGGCC GCCCTCGCAC AGGGCTGA
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| Protein sequence | MIQVPENEHS EAIGRASASG ANALEHNTFG RELLHRIQAG TGPAGDGLTH VADIPSRRAE
FAQWPQWLPS NIRDGFIESG VERPWRHQIE AAEHAHAGRH VVISTGTASG KSLAYQLPVL
AGLATDPRAT VLYLSPTKAL GTDQHAAALR LTSMFDGLGD VSPAMYDGDT SQEMRRWARS
DSRWVFTNPD MIHVGMLPRH AKWARFLRGL RYVVVDECHH YRGVFGSHTA LVLRRLLRVA
AKYGAEPTVI CASATTSDPA GAASRLIGSD CVAVETDSSP HGPRTVVLWE PPLIPDLEGE
NGAPVRRQAT TEAARMMADL VVEGARTLAF VRSRRSAETV ALSTRRMLAE ATPELASRVA
AYRAGYLAED RRALERGLND GELLAVATTN ALELGVDIAG LDAVLMAGFP GTVASFWQQA
GRSGRRGQGS LILLIARDDP LDTYLVHHPE SLLGRPVEAT ITDPWNPYVL GPQLLCAAGE
LPLTREEVTA LGAVDVVGRL TADGLLRERP AGYFLAAGID PHARVNIRGG AGSEVLIVEE
LTGRLLGTVD FNRALSTVYE GAVHVHQGES YVVDELDLDE GLAMVHAEEP EWTTSAREDS
DVRVTGVHQT EELGAVTARF VSVEVTSQVV GYLRTLRTGE VLDAVELDLP ETSLATQAAL
ITIEPDALLA AGLAPEHWPG ALHAAEHAAI GLLPLVASCD RWDIGGLSTA QHEDTGLPSI
FVYDGYPGGA GFAERGYEAI ATWLLATRDA VAACECPAGC PSCVQSPKCG NGNDPLDKAG
AIVVLDLVLA ALAQG
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