| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3825 |
|---|
| Symbol | |
|---|
| ID | 9158005 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 3949368 |
|---|
| End bp | 3950153 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_003648739 |
|---|
| Protein GI | 296141496 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGACGA CCACCCCGAC GCTGGGCCTC GACGGTCTCG TAGTACTCGT GACCGGCGGT
GTGCGCGGGA TCGGCGCAGG CATCGCGCGG GTCTTCCTGC GCGCCGGTGC CACCGTGGTG
GTGTGCGCTC GGCACAGCCC GGAATCCGCG ATCTCGATCG AGGGCAGGTC CGCGGGCTTC
GTGGCCTGCG ACGTGCGTGA GCCGGAGCAG GTCGACGCAC TGATCGGCGG CATCGTCGAG
CGTCACGGTC GTCTGGACGT GCTCGTCAAC AATGCCGGCG GCGCGCCCTA CTCGGACGCG
GCCACCGCGT CACCGCGGTT CCACGACAAG GTGATCGGTC TCAATCTGCT GGCGCCGCTG
CTCGTGGCCC AGCGGGCGAA TGCGGTGATG CAGCAGGCCG GCCGGGGATC GATCATCAAC
GTCTCCAGTG TGAGCGCGAC CCGCCCGTCG CCCGGTACCG CCGCGTACGG CGCGGCGAAA
GCAGGGCTGG ATTCGCTGAC CGCCAGCCTC GCCGTCGAAT GGGCGCCCGC GGTCCGGGTC
AACGCGCTGG ATGTGGGGAT GGTGCGCACC GAGGCCGCGG AGCAGCACTA CGGCGACGAA
GCCGGTATCG CTGCCATCGG GGCCACCGTG CCGTTGGGAA GGCTCGCCGA TCCCGAGGAG
ATCGGTTCCT GTGCAGCCTT TCTCGCTTCA CCTCTGGCCT CGTACGTCAG CGGTGCCACG
CTGCTCGTCC ACGGCGGTGG CGAACGCCCC GCCTTCCTCG CCGCGGCTAC CGCCGACCGC
GCCTGA
|
|---|
| Protein sequence | MTTTTPTLGL DGLVVLVTGG VRGIGAGIAR VFLRAGATVV VCARHSPESA ISIEGRSAGF
VACDVREPEQ VDALIGGIVE RHGRLDVLVN NAGGAPYSDA ATASPRFHDK VIGLNLLAPL
LVAQRANAVM QQAGRGSIIN VSSVSATRPS PGTAAYGAAK AGLDSLTASL AVEWAPAVRV
NALDVGMVRT EAAEQHYGDE AGIAAIGATV PLGRLADPEE IGSCAAFLAS PLASYVSGAT
LLVHGGGERP AFLAAATADR A
|
|---|
| |