Gene Tpau_3804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3804 
Symbol 
ID9157984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp3925092 
End bp3925853 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content69% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003648721 
Protein GI296141478 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCGAT TGGCGGGCAA GCGGGCGCTG GTGACGGGCG GCGCCCGCGG GCAGGGCGCC 
GCAGTGGTGC GGCGCTTCGT GGCCGAGGGA GCGCAGGTGT TGTTCGGCGA TGTGCTCGAC
GAACAGGGGC AGGCGCTGGC CGATGAGCTC GGCGAGGCGG CGATCTACCG CCACCTGGAC
GTGACCTCCG AGGACGACTG GGGGACCGCC GTCGCCGCGG TCCGGGAATC CTTCGGCGGC
CTCGACGTGC TCGTCAACAA CGCCGGCGTC CTGTTCTTCT CGGCGTTGGA GCAGACCGCG
CTGGCCGACT ACGAACGGGT GATTCGGATC AACCAGTTCG GCTGCTTCCT CGGCATGCGT
GCCGCGGTCG AACCGATGAG GGCCGCGGGC GGTGGGTCCA TCGTGAACAC CTCGTCGGTC
GAGGGCCTCG GCGGCATGCC CTACCTCACC GCGTACACCG CGAGTAAGTT CGCCATCCGC
GGGATGACCA AGGCGGCGGC CATGGAGCTC GGGCAGTATG GAATCCGCGT GAATTCGGTG
CATCCCGGGA TGATCGACAC CGCCATGGTG GCCGATGCCC TGGGCGGTAA CGAGCCGCCG
ACGGACTGGC TCAAGCAGCG CCTACCGATC GGCCGGCAGG GCACCGCCGA CGAGATCGCC
GCCATGGTGC TGTTCCTGGC CTCCGATGAG AGCAGCTACA GCACCGGCGC CGAATTCGTC
GCAGACGGCG GTGCTACGGC GACGCATGCG CTGAAGCTGT AA
 
Protein sequence
MTRLAGKRAL VTGGARGQGA AVVRRFVAEG AQVLFGDVLD EQGQALADEL GEAAIYRHLD 
VTSEDDWGTA VAAVRESFGG LDVLVNNAGV LFFSALEQTA LADYERVIRI NQFGCFLGMR
AAVEPMRAAG GGSIVNTSSV EGLGGMPYLT AYTASKFAIR GMTKAAAMEL GQYGIRVNSV
HPGMIDTAMV ADALGGNEPP TDWLKQRLPI GRQGTADEIA AMVLFLASDE SSYSTGAEFV
ADGGATATHA LKL