Gene Tpau_3797 details

Gene Information

• Locus tag: Tpau_3797
• ID: 9157977
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 3918334
• End bp: 3920418
• Gene Length: 2085 bp
• Protein Length: 694 aa
• Translation table: 11
• GC content: 73%
• Product: acyl-CoA dehydrogenase domain protein
• Protein accession: YP_003648714
• Protein GI: 296141471

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCACTCG CCGTCACCGA CGTCCAGCTC GCCCTGGCCG AGTCGATCCG CGACTGGGCC 
GAACGCGCCC ATCCGATCGA CGCCGCCCGT TCCGGCGACC CGGGCGCCAC CGAGAAGGCG 
TGGCGCGGGC TCGCCGATAT CGGCGTCTTC GGGATCACGT TGTCCGAGGA GCTGGGCGGC 
ATGGGTGGTT CCGCCGAGGA TGCCGCTGCG GCGGTCGAGG CGGCGGCGCT GGTGCTGGCA 
CCGGGCCCGG TGGGTGGCAC CGTCACGGTC GCGGCGCTGC TCGAACACTT CCTGCGCGAT 
GACGACCACC TGGCCGCGAC CCGAGCGGCC CTGGCCGCCG GCGACGCCCG CGCCGCGGTG 
GTACTCGGCG GGGACGGGAC CCTCGTCGCC GATGCGGAGT CCGCATCGCA TCTGCTGATC 
GAGGCCCCCG GCGGCATGTG GCACCTCCTG CCGCCCGGCC ACCCCGGAGT CCGCGTGGAA 
CCGCAGACGG GTCTGGACGG TTCACGCCCG CTCGGCCGGG TTCACCTGAC AGAGGTCGTC 
TTCCACGACG CCACCGCCGT TCCCGGACTC ACGTTCGCCG ACGCCGAGGC GTGGGTCGCG 
ACCTTCGTCG CCGCTGAGGC CTCCGCGGTG GCGGCCTGGG CGCTGCGCAC CGCAGCGGAG 
TACTCCCGGG TCCGGGTGCA GTTCGGCAAG CCGATCGGTT CGTTCCAGGC GATCAAACAG 
ATCGCCGCCG ACATGTTGTG CCGGTCCGAG CAGGCGGCCG CGCTGGCCTG GGACGCCGCG 
CGCAGCGCTG GGGGCGGCGA GGAGCATCGG CTGGCGGCGG CCGTCGGCGC GGCCGGGGCA 
CTGGAAGCCG CGGTCGCCAA CGCCAAGGAC GTGATCCAGG TACTCGGGGG TATCGGCTTC 
ACGTGGGAAC ACGACGCGCA CCTCTATCTG CGCCGAGCCC TCGCTCTGCG GCAGCTCGCG 
GGTGGCACCC ACGGGCTGCG GCGCCGCGCC GCGGAGTTGG CCCGGAGTGG GGTGCGGCGC 
CGGTACGACG TGTCCGTCGA GGGCGACCAC GACGGGGCGG CCGCGGAAGC GAAGGCGATC 
GCCGCGCTCC CCGAGGCGGA CCGCCGTCGC GCACTGGCCG AATCCGGACT GCTGGTGCCC 
CACTGGGATC CGCCGTACGG CCGCGGAGCG GGACCGGCGG AGCAGATCGT GCTCGATACC 
GCGCTCGACG CCGCGGGCGT GGAGCGTCCG CCGCTGGTGA TCGGGGCGTG GGCGGCTCCG 
ACGATCCTGG AGCACGGCAC TGCCGACCAG GCGCAACGTT TCGTCTGGCC CACTCTGCTG 
GGCGAGATCA GTTGGTGCCA GCTGTTCAGC GAACCGGAGG CGGGTTCCGA TCTGGCGGCG 
CTGCGCACCC GGGCCGTCCG GGCCGAGGGC GGATGGCGGC TCACCGGGCA GAAGGTGTGG 
ACCTCACTGG CGCACTCGGC CGATTGGGCC ATCTGCCTGG CCCGCACGAA CCCGGAGGCG 
CCGAAGCACA AGGGCATCAC GTACTTCCTG GTCGATATGC GCTCCCCCGG AATCGATATC 
CGGCCGCTGC GCGAGATCAC CGGTGATGAA CGGTTCAACG AGGTCTTCCT CGAGGAGGTC 
TTCGTACCCG ACGAGTGCGT GGTCGGCGAT GTCGACGGCG GCTGGCGTCT GGCACGCACC 
ACGCTCGCCA ACGAGCGGGT CGCGATGAGC GGCAACGGGC TCGGCGCGCG GCTCGAGGCG 
CTGATCGGGC GGCCGGAGAT CGACGACGCC GACTTGGGCG AGCTGATCAC CGAGGCCGCA 
TCGTGTGCAC TGCTGGACCT GCGCGCGGTG ATCGCCAGCG TCGGCGGCCA GGATCCGGGA 
CCATCGTCCA GCGTGCGCAA GCTGGTGGGC GTGCAGCACC GTCAGTCCGT GGCCGAGGCC 
GCCCTGCTGT GCCTCGGCCC CGACGGGGCG GTCGCCGGCC CGGAGGACCC CGAGGACGAG 
CGCTACGAGT TCCTCCTCAC TCGCTGCCTG TCGATCGCCG GCGGCACCTC CCAAATCCTC 
CGCAACGTGG CCGCGGAACA CCTGCTCGGC CTCCCCCGCT CCTAA 

 

Protein sequence

MALAVTDVQL ALAESIRDWA ERAHPIDAAR SGDPGATEKA WRGLADIGVF GITLSEELGG 
MGGSAEDAAA AVEAAALVLA PGPVGGTVTV AALLEHFLRD DDHLAATRAA LAAGDARAAV 
VLGGDGTLVA DAESASHLLI EAPGGMWHLL PPGHPGVRVE PQTGLDGSRP LGRVHLTEVV 
FHDATAVPGL TFADAEAWVA TFVAAEASAV AAWALRTAAE YSRVRVQFGK PIGSFQAIKQ 
IAADMLCRSE QAAALAWDAA RSAGGGEEHR LAAAVGAAGA LEAAVANAKD VIQVLGGIGF 
TWEHDAHLYL RRALALRQLA GGTHGLRRRA AELARSGVRR RYDVSVEGDH DGAAAEAKAI 
AALPEADRRR ALAESGLLVP HWDPPYGRGA GPAEQIVLDT ALDAAGVERP PLVIGAWAAP 
TILEHGTADQ AQRFVWPTLL GEISWCQLFS EPEAGSDLAA LRTRAVRAEG GWRLTGQKVW 
TSLAHSADWA ICLARTNPEA PKHKGITYFL VDMRSPGIDI RPLREITGDE RFNEVFLEEV 
FVPDECVVGD VDGGWRLART TLANERVAMS GNGLGARLEA LIGRPEIDDA DLGELITEAA 
SCALLDLRAV IASVGGQDPG PSSSVRKLVG VQHRQSVAEA ALLCLGPDGA VAGPEDPEDE 
RYEFLLTRCL SIAGGTSQIL RNVAAEHLLG LPRS