| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3694 |
|---|
| Symbol | |
|---|
| ID | 9157874 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 3811825 |
|---|
| End bp | 3812850 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | periplasmic binding protein |
|---|
| Protein accession | YP_003648611 |
|---|
| Protein GI | 296141368 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.792098 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACACCTC GATTCCGTCG AGCGCGTGCT GCGCTCGCCG TCACCGCCGC CGCGGCCGTA
CTGGTCACAG CAGGCTGCGG CTCGAACGGC TCGTCCGGCG ACAGCGCTCC GTCGCAGGAT
GCGGGCTTCC CCGTGTCCAT CCAATCGGCG CTCGGCACCG CCGAGATCAG GTCGAAGCCG
CAGCGCGTCG TGACACTCGG CTGGGGCAGC ACCGAGGCCG CGGTCGCGCT CGGGGTCATC
CCGGTGGGCA TGCGCGATAT GAAGTCCGAC TCCGGCACGG TCGACGGCAT CCTGCCGTGG
GTGAAGGACA AACTGGGCGA TGCGAAACCC GAGTTGCTCC CGGAGAGCAG CAAGTCGATT
CCGATCGAGC AGATCGCGGC GCTCAAGCCG GACGTGATCC TGTCGGTGCA GTCGGGCCTC
ACGCCCGACC AGTACGCACA GCTGAGCAAG ATCGCGCCGA CGGTGGCGCA GCCCGGCAAG
AACTGGCAAA CGTCCTGGCA GGATCAGACC ACCCTCGTCG GCAAGGCGCT CGGCAAGGAG
GCCGACGCCA AGAAGCTGAT CGAGGACGCC GACAAGAAGA TCGCGGACGT CAAGGCCGCG
AACCCCGGAT TCGCCGGTAA GACGGTGGTC GCCGCGAGCG GCACCACGCC CGATGGCCTG
AACCTGTACT TCGATACCGA CCCGCGGATC AAGCTGCTCG CCGGCTTCGG CTTCACTCCG
CTGCCCGCGC TCACCCAGCT GCGGGAGAGC ACCCAGCCGG GCAAGTTCGC CGCACCGGTG
AGTTGGGAGA ACGTATCGAA GTACAACGCT GACGTGCTGA CCTCGTGGTA CCTCGACGCT
ACCCAGCAGA GCGTGGAGGC CAACCCGGTC TTCACCAGTC TGACCGCGGT GCAGAAGAAG
GCCTACGTGC CGCTGACCGA CCCGCCGCTG GTGTTCGCGG TGAGCTCGCC GAACGTGCTC
GACCTGCCGT GGCTGGTGGA GCGCTACGTT CCGTTGTTGC AGACGGCGGC GAAGAACGCG
GGCTGA
|
|---|
| Protein sequence | MTPRFRRARA ALAVTAAAAV LVTAGCGSNG SSGDSAPSQD AGFPVSIQSA LGTAEIRSKP
QRVVTLGWGS TEAAVALGVI PVGMRDMKSD SGTVDGILPW VKDKLGDAKP ELLPESSKSI
PIEQIAALKP DVILSVQSGL TPDQYAQLSK IAPTVAQPGK NWQTSWQDQT TLVGKALGKE
ADAKKLIEDA DKKIADVKAA NPGFAGKTVV AASGTTPDGL NLYFDTDPRI KLLAGFGFTP
LPALTQLRES TQPGKFAAPV SWENVSKYNA DVLTSWYLDA TQQSVEANPV FTSLTAVQKK
AYVPLTDPPL VFAVSSPNVL DLPWLVERYV PLLQTAAKNA G
|
|---|
| |