Gene Tpau_3538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3538 
Symbol 
ID9157717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp3650107 
End bp3650769 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content68% 
IMG OID 
Productphosphate uptake regulator, PhoU 
Protein accessionYP_003648456 
Protein GI296141213 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTACCG CGTACACCCA GCAGATGGCT GCGTTCAATG ACATTCTCGG TGACATCTGC 
GGCAAGTCGG GTGTGGCCAT GGAGAAGGCC ACCAACGCCC TGCTGCAGGC CGACCTGGAG 
CTCGCCGAAG AGGTGATCTC CGGTCACGAC GAGATCGTCC GGCTGAGCCG CCGCGCCGAG 
GAGGAGGCCT TCTCCCTGCT CGCGCTGCAG GCGCCGGTCG CCAGCGACCT GCGCGTCGTG 
GTCTCCGGCT TCCAGATCGT CGCGGACGTC GACCGGATGG GCGCGCTCGC GCTGCACGTC 
GCGAAGGTCA CCCGTCGCCG GTTCCCGAAT AAGACGCTCC CCGAGGAGGT CAACGGCTAC 
TTCGCGGAGA TGGGCCGCCT CGCGGTCGAG CTCGCCAACT CCGCCCGCGA GGTGCTGCTC 
ACGCAGGACC CGAAGCAGGC TGCGGAGATC GAGGAGCAGG ACGACGCGAT GGACGATCTG 
CACCGCCACC TGTTCACGGT GCTGATGGAC CGGGACTGGA AGCACGGTGT GGCCGCCGCC 
GTCGACGTGA CCCTGTTGGG CCGCTACTAC GAGCGGTTCG CCGACCACGC CGTCGAGATC 
GGCCGCCGCG TCATCTTCCA GGCCACCGGC AACGCCGAGC CCACCGCCGA CATCTCCAAC 
TGA
 
Protein sequence
MRTAYTQQMA AFNDILGDIC GKSGVAMEKA TNALLQADLE LAEEVISGHD EIVRLSRRAE 
EEAFSLLALQ APVASDLRVV VSGFQIVADV DRMGALALHV AKVTRRRFPN KTLPEEVNGY 
FAEMGRLAVE LANSAREVLL TQDPKQAAEI EEQDDAMDDL HRHLFTVLMD RDWKHGVAAA 
VDVTLLGRYY ERFADHAVEI GRRVIFQATG NAEPTADISN