Gene Tpau_3534 details

Gene Information

• Locus tag: Tpau_3534
• ID: 9157713
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 3645876
• End bp: 3646496
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 73%
• Product: two component transcriptional regulator, LuxR family
• Protein accession: YP_003648452
• Protein GI: 296141209

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCGACG TACTGCTCGC CGACGACGAG CACCTGATCC GCACGGCGAT GGCGGCCCTC 
CTCGACCTGG AGGACGACCT GCACGTGGCC GCCGAAGCGG GGTCGGGCAC CGAGCTGCTG 
GCCCGGTGGC GGCGCCGGAT CGACGAGGGA CTACCGCCCG CGGTCGCCGT CCTCGACCTG 
CAGATGCCGG GCATGGACGG GATCGACACC GCCGCCGAAC TGCTCCGCCT GACCCCCGGG 
GCGGGCACCC TGATCGTGAC CAGCCACGGG CGCCCCGGCT ATCTCAAACG CGCCCTGTCC 
ATCGGAGTCC GAGGCTTCCT GCCGAAAACA GCCCCGGCCG CCACGCTGGC ACAGGTGATC 
CGCACCGTCC ACGACGGCGG CCGGTACGTC GACCCGGAGC TGGCGGCCGA GGCGATCAGT 
GCCGGTGACT CCCCGCTCAC GCCGCGCGAG GCCGATGTCC TGGAGTTCGC GGCCGACGGC 
GCCTCGGTCG ACGAGATCGC CCGCCGCGCC CACCTGACCC CCGGAACCAC GCGCAACTAT 
CTGTCGTCGG CGGTCGCCAA ACTCGGCGTC GCCAACCGCT ACGAGGCCAC CCTCCGGGCC 
CGGGAGCGCG GCTGGATCTG A 

 

Protein sequence

MIDVLLADDE HLIRTAMAAL LDLEDDLHVA AEAGSGTELL ARWRRRIDEG LPPAVAVLDL 
QMPGMDGIDT AAELLRLTPG AGTLIVTSHG RPGYLKRALS IGVRGFLPKT APAATLAQVI 
RTVHDGGRYV DPELAAEAIS AGDSPLTPRE ADVLEFAADG ASVDEIARRA HLTPGTTRNY 
LSSAVAKLGV ANRYEATLRA RERGWI