Gene Tpau_3400 details

Gene Information

• Locus tag: Tpau_3400
• ID: 9157575
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 3491072
• End bp: 3491719
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 68%
• Product: ribosomal protein S5
• Protein accession: YP_003648323
• Protein GI: 296141080

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.608039
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCGGAC GTCAGCGTCG TGACGGCGGC AACAACGGCC CCGCCGGAAA CAACGGTCCC 
GACAACAACA GCAACGACCG CCGCGGCGGT CGTGGTCGCG ATCGCGACCA GCGCGGTGGT 
CGTGAGGCCG AGAAGAGCAA CTACATCGAG AAGGTTGTCA CCATCAACCG TGTCTCGAAG 
GTCGTGAAGG GTGGTCGTCG CTTCAGCTTC ACCGCCCTCG TGATCGTCGG CGACGGCCAG 
GGCATGGTCG GCGTCGGTTA CGGCAAGGCC AAGGAAGTTC CCGCGGCCAT CCAGAAGGGC 
GTCGAGGAGG CTCGGAAGAA CTTCTTCCGC GTCCCCATGA TCGGCAACAC CATCGTGCAC 
CCGGTTCAGG GTGAGGCCGC GGCCGGCGTC GTGCTGCTGC GTCCCGCCAG CCCGGGTACC 
GGTGTGATCG CCGGTGGCGC CGTGCGTCCC GTGCTCGAGG CGGCCGGCGT CCACGACGTC 
ATCGCCAAGA GCCTCGGCTC GGACAACGCC ATCAACGTGG TCCACGCGAC CGTCGCCGCT 
CTCAAGGAGC TGCAGCGTCC GGAGGAGGTC GCGGCTCGTC GCGGCCTGCC CATCGAGGAC 
GTCGCTCCCG CGGGCATGCT GCGTGCGCGT GCAGGTCAGG GAGCGTAA 

 

Protein sequence

MPGRQRRDGG NNGPAGNNGP DNNSNDRRGG RGRDRDQRGG REAEKSNYIE KVVTINRVSK 
VVKGGRRFSF TALVIVGDGQ GMVGVGYGKA KEVPAAIQKG VEEARKNFFR VPMIGNTIVH 
PVQGEAAAGV VLLRPASPGT GVIAGGAVRP VLEAAGVHDV IAKSLGSDNA INVVHATVAA 
LKELQRPEEV AARRGLPIED VAPAGMLRAR AGQGA