Gene Tpau_3379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3379 
Symbol 
ID9157554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp3475645 
End bp3476295 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content65% 
IMG OID 
ProductSNARE associated Golgi protein-related protein 
Protein accessionYP_003648302 
Protein GI296141059 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACCCCT TCGATGTCAC CGGCTTCCTC GGGTCCGCGG GCCTGATCGG CTTGATCGTG 
CTGATCTTCG TCGAGACCGG TCTGTTGGTG GGCTTCATCT TCCCGGGCGA CTCGATCCTG 
TTCACCGCGG GCATCTTCGC CGCGCAGCCG CAGCCCTTCG CTCAGCTGTG GCAACTGCTG 
GTGTTCCTGC CGCTCGCCGC GATCGTCGGC GACCAATGCG GATACGCGAT CGGCCGATAT 
GCGGGGCCGA AGGTGATGCG CGGCCGGGTG ATGAACTTCA TCGGCCAGGG ACCCGTCGAT 
AAGACGTACG AGTTCTTCGA CAAGTACGGG CCGTTCACGG TGCTGTTCGC CCGGTTCATC 
GGCATCGTGC GCACCCTGGT GCCGGTGCTG GCCGGGTTCT CGAAGATGGA CCACCGCAAG 
TTCACCCTGT TCTCGGTGCT CGGCTCGCTG CTGTGGTGCG ACGGGATCGT GCTCCTGGGC 
TATTTCCTGG GCGGTATCCC GCTGTTGCGC GACAACCTCG AAGTGCTGTT CATCGGCTCC 
GCGATCACCA TCATCGTGCC GATCGCGATC ACCGTGATCA CCCGCCGCCG GGCCCGCCGC 
CGCGAGGAAG CGGCACGGGA AGTCGCGGAA ACCGCCCCCG CCGACCGATA G
 
Protein sequence
MNPFDVTGFL GSAGLIGLIV LIFVETGLLV GFIFPGDSIL FTAGIFAAQP QPFAQLWQLL 
VFLPLAAIVG DQCGYAIGRY AGPKVMRGRV MNFIGQGPVD KTYEFFDKYG PFTVLFARFI 
GIVRTLVPVL AGFSKMDHRK FTLFSVLGSL LWCDGIVLLG YFLGGIPLLR DNLEVLFIGS 
AITIIVPIAI TVITRRRARR REEAAREVAE TAPADR