Gene Tpau_3320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3320 
Symbol 
ID9157494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp3413679 
End bp3415646 
Gene Length1968 bp 
Protein Length655 aa 
Translation table11 
GC content70% 
IMG OID 
ProductCarbamoyl-phosphate synthase L chain ATP- binding protein 
Protein accessionYP_003648244 
Protein GI296141001 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGAGA AGGTCTTGAT CGCCAACCGC GGCGAGATCG CCTGCCGTGT CATCGAGACA 
CTGCGGGAAC AAGGGATCGC CAGCGTCGCC GTCTATTCGG ACGCCGATGC CGACGCGCGG
CACGTCCGGC TCGCCGACGA GGCCGTGCGC CTCGGTCCCG CCGCGGCCAC TGAGAGCTAC
CTGCGGATCG ATGCCGTGGT CGACGCCGCG CGCGCCACCG GCGCCGACGC CGTTCATCCG
GGCTACGGAT TCCTCTCCGA GAACGCGGCA TTCGCGCGAG CACTTGACGC GGCCGGCATC
GAATTCCTCG GCCCACCCGT GGCAGCAATC GAGACCATGG GTGATAAGAT CACCGCCCGT
GCCGCCGTTG TCGAGCGTGA TGTGCCGGTG GTCCCCGGAA TCAGCCGTCC CGGCCTCACC
GATGCCGACC TGATCGCCGC CGCCGACGAT ATCGGCTTCC CCGTGCTGAT CAAGCCGAGC
GCGGGCGGCG GCGGCAAGGG CATGCACCGG GTGCAGAACC CGGCGGATCT CCCCGCCGCG
GTCGCCGCCG CACGGCGCGA GGCCGCCGCC GCCTTCGGTG ACGACACGCT GTTCATGGAG
CATTTCGTGG ATACGCCTCG CCACATCGAG GTGCAGGTGC TCGCGGACAA GCACGGCAAC
GTGATCCATC TGGGCGAGCG GGAATGCTCG CTGCAGCGCC GCCACCAGAA GGTGATCGAG
GAGGCCCCGT CGGCGTTGCT CGACGCAGCC ACTCGCGAGC GGATCGGCCG GGCGGCGTGC
GACGCCGCGC GCTCGGTCGG GTACACCGGT GTGGGTACCG TCGAGTTCAT CGTCTCGGCG
CACCGGCCCG ACGAGTTCTT CTTCATGGAG ATGAACACCC GTCTGCAGGT GGAGCACCCG
GTCACCGAGC TGGTGACCGG AATCGATCTG GTGCAGCAGC AGATCCGCGT CGCGAACGGG
GAGAAGCTCG GCATCGCGCA GGACGAGATC ACGCTCACCG GGCACGCTGT CGAGGCGCGC
ATCTACGCCG AGGATCCGGC CGCCGGATTC CTACCGACCG GCGGCACCGT GACCGGTCTG
CGCTACCCGC GCGGCGACCG CCGCGGCCCG ATCCGGGTGG ACACCGGCAT CGTCGACGGC
AGTGTGGTGG GCAGCGATTA CGACCCGATG CTGGCGAAGG TGATCGTGCA CGCCACCGAT
CGCGAGCAGG CACTGCGACG GCTCGACGAG GCGCTCTCGG CCACCCAGCT CACCGGTCTG
CGGACCAACG TCGACTTCTG CCGGTTCGTG CTCGACGACG CCGATGTGGT GTCCGGCAAC
CTCGACACCG AACTGCTCGA TCGTCTGGCG CCCACGTACA CCCGGCCCGA ACCCACCGCC
CGCGCCTACG CGGCGGCCGC GTTGCGCGCC GTCGCGGACT CTCGCTCCGA GGGACCGTGG
GGTACCGAGA CCGGCTGGCG GATCGGTGGC GCAGCGCCGG TCATCATTCG CTTCGCTGGT
GCCGGTGCGG CCGAGGCCGT CACGGTCTCT GTTCTCGGCG ATACGGTCAC CGTGCACGGG
GGCGGGATCG ACTGGGACGG AACCGCCCGC CTCGACGGTG AGCGGCTCAC CGTCGACGGC
CGCACCTCAC CGGTCACCGT GGCTGTGACG GGCGGGACGT ACTGGGTCAG CGGTGTCGAC
GGTTCCTTCG AGCTGTCCTT GGCCCGCAGC GCCTCGAAGG ACCGCGACGG CGCTCACGAC
GGCGAAGTGA CCAGCCCGAT GCCCGGTGCC GTGGTCGCTG TGCCGGTCAC GGACGGTCAG
GCCGTGAGCA AGGGCGAGAC CGTAGTGATC ATCGAGGCCA TGAAGATGGA GCAACCGCTG
ACCGCGCCGC ACGACGGCAC GGTGACCCTG GCGGTTCGCG TGGGAGAGAA GGTGAACGCC
GCGCAGGTAC TGGCGGTGGT CGCACCGGAA CAAGCGGGAG AGAACTGA
 
Protein sequence
MIEKVLIANR GEIACRVIET LREQGIASVA VYSDADADAR HVRLADEAVR LGPAAATESY 
LRIDAVVDAA RATGADAVHP GYGFLSENAA FARALDAAGI EFLGPPVAAI ETMGDKITAR
AAVVERDVPV VPGISRPGLT DADLIAAADD IGFPVLIKPS AGGGGKGMHR VQNPADLPAA
VAAARREAAA AFGDDTLFME HFVDTPRHIE VQVLADKHGN VIHLGERECS LQRRHQKVIE
EAPSALLDAA TRERIGRAAC DAARSVGYTG VGTVEFIVSA HRPDEFFFME MNTRLQVEHP
VTELVTGIDL VQQQIRVANG EKLGIAQDEI TLTGHAVEAR IYAEDPAAGF LPTGGTVTGL
RYPRGDRRGP IRVDTGIVDG SVVGSDYDPM LAKVIVHATD REQALRRLDE ALSATQLTGL
RTNVDFCRFV LDDADVVSGN LDTELLDRLA PTYTRPEPTA RAYAAAALRA VADSRSEGPW
GTETGWRIGG AAPVIIRFAG AGAAEAVTVS VLGDTVTVHG GGIDWDGTAR LDGERLTVDG
RTSPVTVAVT GGTYWVSGVD GSFELSLARS ASKDRDGAHD GEVTSPMPGA VVAVPVTDGQ
AVSKGETVVI IEAMKMEQPL TAPHDGTVTL AVRVGEKVNA AQVLAVVAPE QAGEN