Gene Tpau_3286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3286 
Symbol 
ID9157460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp3382809 
End bp3383495 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content69% 
IMG OID 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_003648210 
Protein GI296140967 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.167791 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGATTC TGGTGGTCGA CGATGACCGT GCGGTTCGCG AGTCGCTGCG GCGCTCGCTC 
ACGTTCAACG GGTACCAGGT GGACACCGCG GTCGACGGGC AGGACGCGCT GGATCACATC 
GCGAGCAACC GGCCGGACGC GCTGGTGCTC GACCTGAACA TGCCCCGTCT GGACGGGCTC 
GAAGTGTGTC GCCGCCTGCG CAGTGCCGGC GACGATCTGC CGATCCTCGT GCTCACCGCG 
CGCGACGGCG TCAGCGATCG GGTCAGTGGG CTCGATGCGG GCGCCGACGA CTACCTGCCC 
AAGCCCTTCG CGCTCGAGGA GTTGCTGGCG CGGATGCGGG CGCTGTTGCG TCGCGCCGTG 
CCGGACACCG CTTCGGATAA CGAGGTGCTG CGGTTCGAGG ACCTCACGCT CGATCCGGCC 
ACCCGCGAGG TGAGCCGCGG CGATCGGTCG ATCAGCCTCA CTCGTACCGA GTTCAGCCTG 
CTCGAGATGC TTATGGGCAA CCCCCGCCGC GTGCTCACCC GTAGTCGCAT CCTGGAGGAG 
GTGTGGGGCT ACGACTTCCC GACTTCGGGC AATGCGCTGG AGGTGTACGT CGGGTACCTG 
CGCCGTAAGA CCGAGGCCGA CGGTGAGCCG CGCCTGATCC ACACCGTCCG GGGCGTGGGC 
TACGTCCTGC GCGAGACTCC GCCGTGA
 
Protein sequence
MRILVVDDDR AVRESLRRSL TFNGYQVDTA VDGQDALDHI ASNRPDALVL DLNMPRLDGL 
EVCRRLRSAG DDLPILVLTA RDGVSDRVSG LDAGADDYLP KPFALEELLA RMRALLRRAV 
PDTASDNEVL RFEDLTLDPA TREVSRGDRS ISLTRTEFSL LEMLMGNPRR VLTRSRILEE 
VWGYDFPTSG NALEVYVGYL RRKTEADGEP RLIHTVRGVG YVLRETPP