Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_3248 |
Symbol | |
ID | 9157421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 3351521 |
End bp | 3352195 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_003648172 |
Protein GI | 296140929 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACGTTCG TGTTGGTGGT CGACGACGAG CCGGCGATCT GCCGGACGCT GCGGATCAAT CTCAAGGCCC GAGGCTACGA GGTGGAGACG GCGACCGATG GCCGGTCGGC GTTGCAGATC GCCCGCGAGC GGACGCCCGA TGTCGTGATC CTCGATCTCG GTCTGCCGGA CATCGACGGG GTGACGGTGC TGTCCAAGCT GCGTGAGTTC TGCGCGTCAC CGGTGATCGT GCTGTCGGCG CGGCATGGGA GCGACGACAA GGTCGAATCG CTCGACGCCG GTGCCGACGA CTACGTGACC AAGCCCTTCG GTATGGACGA GTTCCTCGCC CGGGTGCGGG CGCAGGTGCG GCGGACGGGA CTGGTGGATG CGCCGGCGCC GGTGGTCACC GATGCCTTCG AGGTGAACTT CGAGGCGCGG ACGGTGACTC GCGACGGTAA GCCCGTGCGG CTCACGCCCA CCGAGTGGAA GATCGTGGAC GTGCTGGTGC GCAATGCCGA TCGCCTGGTC TCGCAGCAGA CCCTGCTGCA CGAGGTGTGG GGCCCGTCGT ACTCGCGCGA GACGAACTAC CTGCGGGTGT ACCTGGCGCA GCTGCGCCGC AAGTTGGAGC CCGACCCCGC GCACCCCCGG TATTTCGTCA CCGAGCCCGG GATGGGGTAC CGCTTCATCC CGTAA
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Protein sequence | MTFVLVVDDE PAICRTLRIN LKARGYEVET ATDGRSALQI ARERTPDVVI LDLGLPDIDG VTVLSKLREF CASPVIVLSA RHGSDDKVES LDAGADDYVT KPFGMDEFLA RVRAQVRRTG LVDAPAPVVT DAFEVNFEAR TVTRDGKPVR LTPTEWKIVD VLVRNADRLV SQQTLLHEVW GPSYSRETNY LRVYLAQLRR KLEPDPAHPR YFVTEPGMGY RFIP
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