Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_3171 |
Symbol | |
ID | 9157343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 3274725 |
End bp | 3276005 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | NADH dehydrogenase I, D subunit |
Protein accession | YP_003648097 |
Protein GI | 296140854 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCGCCA GCTACACCGC CATGGGCTCG GACTGGGATG AGATCGCCGC GGAGGCCGTC GGTCACGAGC GGATCGTGGT CAACATGGGC CCGCAGCACC CGTCCACACA CGGGGTGCTG CGTCTGATCC TCGAACTGGA CGGCGAGACC GTGACCGAGG CCCGGTGCGG CATCGGCTTC CTGCACACCG GGATCGAGAA GAATCTGGAG TTCCGGACCT GGACCCAGGG CACCACCTTC GTCACTCGGA TGGACTACCT GGCGCCCCTG TTCAACGAGA CCGCGTACTG CCTGGCGGTG GAGAAGCTGC TCGGCATCAC CGACGAGATC CCCGAACGCG CCACGGTGAT CCGCGTCCTG ATGATGGAAC TCAACCGGGT CACCAGCGAC CTCGTGGCGC TCGCCACCGG CGGTATGGAG TTGGGTGCGG TCTCGCCCAT GCTCAAGGGG TTCGAGATCC GCGAGCAGAT CCTGAACGTG TTCGAGACGA TCACCGGGCT GCGGATGAAC CACGCGTACA TCCGGCCGGG CGGCGTGGCC GCAGACCTGC CCGACGACGC GCTTCCGCAG ATCCGGGAGC TGCTGCGCAC CCTGCCCCCG CAACTGGACT CGATGGCGGG AATGCTCACC GGCAATCCCA TCTGGATGGC CCGCACCAAG GACGTCGGTT ACCTCGATCT CACCGGAGCC ATGGCACTGG GCATCACGGG GCCGGTGCTG CGGTCCACCG GGCTCCCCCA CGACCTGCGG CGCAGCGAAC CCTACTGCGG ATACGAGGAC TACGAGTTCG ACGTCATCAC CGATACCGGA TGCGACTGCT ACGGCCGGTA CCTGATCCGC GTGCACGAGA TGACGCAGTC GCTGCGCATC GTCGAGCAGT GCCTGGACCG TCTCGCGCCG GGGCCGGTGA TGATCGACGA TGCCCGGTTG GGCTGGCCGG CCGATCTCAC CGTGGGGCCC GACGGTCTCG GCAACTCGCG CGCCCACATC GCAGAGATCA TGGGCGAGTC GATGGAGTCG CTGATCCACC ACTTCAAACT GGTCACCGAG GGCTTCGCGG TACCCGCCGG CCAGGTCGCC GTTTCGGTGG AGGCGCCGCG CGGCGAGCTG CTGGTGCACG CCGTGAGTGA CGGCGGCACC CGGCCGTACC GGGTGCACTT CCGCGACCCG TCGTTCACGA ATCTGCAGGC GGTGGCGGCG ATGTGCGAGG GCGGCATGGT CTCGGATGTG ATCGCCGCGG TGGCCAGCAT CGACCCGGTG ATGGGAGGAG TGGACCGATG A
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Protein sequence | MTASYTAMGS DWDEIAAEAV GHERIVVNMG PQHPSTHGVL RLILELDGET VTEARCGIGF LHTGIEKNLE FRTWTQGTTF VTRMDYLAPL FNETAYCLAV EKLLGITDEI PERATVIRVL MMELNRVTSD LVALATGGME LGAVSPMLKG FEIREQILNV FETITGLRMN HAYIRPGGVA ADLPDDALPQ IRELLRTLPP QLDSMAGMLT GNPIWMARTK DVGYLDLTGA MALGITGPVL RSTGLPHDLR RSEPYCGYED YEFDVITDTG CDCYGRYLIR VHEMTQSLRI VEQCLDRLAP GPVMIDDARL GWPADLTVGP DGLGNSRAHI AEIMGESMES LIHHFKLVTE GFAVPAGQVA VSVEAPRGEL LVHAVSDGGT RPYRVHFRDP SFTNLQAVAA MCEGGMVSDV IAAVASIDPV MGGVDR
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