Gene Tpau_3170 details

Gene Information

• Locus tag: Tpau_3170
• ID: 9157342
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 3274018
• End bp: 3274728
• Gene Length: 711 bp
• Protein Length: 236 aa
• Translation table: 11
• GC content: 69%
• Product: NADH (or F420H2) dehydrogenase, subunit C
• Protein accession: YP_003648096
• Protein GI: 296140853

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGACG ATCCCGACGG CACCGTCGAA CCCGTGGGCC CGCCGCCCGA GGTGGTACGC 
ACCCGGCACG GCATGTTCGG CTCGGCCGGG AGCGGCGACA CCTCGGGCTA CGGCCGGATC 
ACGCGCCCCG TCACCATGCC GGGCCCCGGC GACGAGCCGA TGCCCGACGG ATACGACGGG 
GTGTTGACTC GCCTGCGTAC TGCACTCGAC GAGCACCAGG GTGCACCGCC GTTCGCCGAA 
GCGGTCCGCT CCGTGGTGGT CCACCGCGGC GAGGTCACGC TCCGGGTGCC CCGCCAACAC 
GTGGTCGCGG TGGCCCGTCT GCTGCGCGAC GATCCTTCGT TGCGATTCGA GATGTGCCTG 
GGCACCTCCG GCGTGCACTT CCCCGAGGAC ACCGGCGCGG AACTGCGCGC GGTGACCCAT 
CTGCAGTCCA TCACGTGGGG ACGCCGGCTG CGACTTGAAA CCCATTGCCC GCAAGCAGAT 
CCACACATTC CCTCCCTGAT CTCGGTGTAT CCCACGGTGG ATTGGCACGA GCGGGAGACC 
TTCGACTTCT TCGGCATCGT CTTCGACGGA CACCCCTCGC TCACCCGGAT CGAGATGCCG 
GACGACTGGG ATGGGCACCC GCAGCGTAAG GACTACCCGC TCGGCGGGAT CGGGGTCGAG 
TTCCTCGGCG CTCAGGTGGC GCCGCCGGAT TCGCGGAGGT CGTATTCGTG A 

 

Protein sequence

MTDDPDGTVE PVGPPPEVVR TRHGMFGSAG SGDTSGYGRI TRPVTMPGPG DEPMPDGYDG 
VLTRLRTALD EHQGAPPFAE AVRSVVVHRG EVTLRVPRQH VVAVARLLRD DPSLRFEMCL 
GTSGVHFPED TGAELRAVTH LQSITWGRRL RLETHCPQAD PHIPSLISVY PTVDWHERET 
FDFFGIVFDG HPSLTRIEMP DDWDGHPQRK DYPLGGIGVE FLGAQVAPPD SRRSYS