Gene Tpau_3137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3137 
Symbol 
ID9157308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp3246122 
End bp3247180 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content69% 
IMG OID 
ProductSubstrate-binding region of ABC-type glycine betaine transport system 
Protein accessionYP_003648063 
Protein GI296140820 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.246903 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCGCC GCGCCACCGG GGCTAGCACC GGAGCCCTGA AGGCCGCCGC TCTCGTCGCC 
ATCGGGCTCA CGCTCTCGGG CTGCATCGTC GAATCCGGAC GGCCCGAGCA GTCCCGGTCG
ATCGGCGGCG CCACGCCGTG CCCCGTCGCG CCCGATCCGT CGGTCACGGG GACGGTCCGC
ATCGGCTGGC AGGAGATCCC GAACGGTGAC CTCATCGTCA AGGACACCGG CCTCCTGAAC
ACCTGCCTGC CCAACGTGAA GACGGTGTGG AGCAAGTTCT CCTCCGGCGG CGACGTGATC
CAGGCCTTCG GCGCCAACTC CCTCGACATC GGGCTGCTGG GGAGTGCGCC CGCCGCGAAG
GCCTTGTCGG CGCCGCTCAA CATCGACATG AAGGTGATCT GGATCCAGGA CCGGATCGGC
GCCGCGGAAT CGCTGGTCGC CAAGGACCCG GCCGTGAAGA CCGTCGGGGA TCTGAGGGGT
AAGCGGATCG CCGTGCCCTT CGCCTCCACA GCGCACTACA GCCTGCTCAC CGCCCTCGAC
AAGGCCGGTG TCACCGACGC TCAGGTGATC AACCTGGCCC CCGATGCCAT CCGCGGGGCC
TGGAGCGGTG GGCAGATCGA CGCCACCTAC ATCTGGGAGC CCACGCTGAG CCAGCTCAAG
GGAAACCCGG TCACCGACAG CGCGAAGGTC GCGGAGCAGG GTGCACCGAC CTTCGACCTC
GAAGGCGCGC GCGGGGACTT CGTCAAGGAC AACCCGGCCT TCCTCAAGGC CTGGAGCGCG
GCCCAGGGAT GGGCGGCGAA CCTGCTCAAC ACCGACCCGA ACAAGGCCGC CGAGCACATC
GCCGGCCAGC TCGGCGTGCC CCTGGAGCAG GTGCTCACGC AGATCAAGGG CTACGCCTAC
TTCGACCGGG CCACGCAGGC CGGCCCCGAC TATCTGGGCG GCCAGCTCGG CGCCGACATC
CGCAAGACCG CGGAGTTCCT GCTCCAACAG GGCCAGGTGC AGGGCGTCGG CCCGGCGCAG
CACTACACCG ACGGTGTGTA CGGGGAGGCA GTGAAATGA
 
Protein sequence
MIRRATGAST GALKAAALVA IGLTLSGCIV ESGRPEQSRS IGGATPCPVA PDPSVTGTVR 
IGWQEIPNGD LIVKDTGLLN TCLPNVKTVW SKFSSGGDVI QAFGANSLDI GLLGSAPAAK
ALSAPLNIDM KVIWIQDRIG AAESLVAKDP AVKTVGDLRG KRIAVPFAST AHYSLLTALD
KAGVTDAQVI NLAPDAIRGA WSGGQIDATY IWEPTLSQLK GNPVTDSAKV AEQGAPTFDL
EGARGDFVKD NPAFLKAWSA AQGWAANLLN TDPNKAAEHI AGQLGVPLEQ VLTQIKGYAY
FDRATQAGPD YLGGQLGADI RKTAEFLLQQ GQVQGVGPAQ HYTDGVYGEA VK