Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_3137 |
Symbol | |
ID | 9157308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 3246122 |
End bp | 3247180 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | Substrate-binding region of ABC-type glycine betaine transport system |
Protein accession | YP_003648063 |
Protein GI | 296140820 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.246903 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCGCC GCGCCACCGG GGCTAGCACC GGAGCCCTGA AGGCCGCCGC TCTCGTCGCC ATCGGGCTCA CGCTCTCGGG CTGCATCGTC GAATCCGGAC GGCCCGAGCA GTCCCGGTCG ATCGGCGGCG CCACGCCGTG CCCCGTCGCG CCCGATCCGT CGGTCACGGG GACGGTCCGC ATCGGCTGGC AGGAGATCCC GAACGGTGAC CTCATCGTCA AGGACACCGG CCTCCTGAAC ACCTGCCTGC CCAACGTGAA GACGGTGTGG AGCAAGTTCT CCTCCGGCGG CGACGTGATC CAGGCCTTCG GCGCCAACTC CCTCGACATC GGGCTGCTGG GGAGTGCGCC CGCCGCGAAG GCCTTGTCGG CGCCGCTCAA CATCGACATG AAGGTGATCT GGATCCAGGA CCGGATCGGC GCCGCGGAAT CGCTGGTCGC CAAGGACCCG GCCGTGAAGA CCGTCGGGGA TCTGAGGGGT AAGCGGATCG CCGTGCCCTT CGCCTCCACA GCGCACTACA GCCTGCTCAC CGCCCTCGAC AAGGCCGGTG TCACCGACGC TCAGGTGATC AACCTGGCCC CCGATGCCAT CCGCGGGGCC TGGAGCGGTG GGCAGATCGA CGCCACCTAC ATCTGGGAGC CCACGCTGAG CCAGCTCAAG GGAAACCCGG TCACCGACAG CGCGAAGGTC GCGGAGCAGG GTGCACCGAC CTTCGACCTC GAAGGCGCGC GCGGGGACTT CGTCAAGGAC AACCCGGCCT TCCTCAAGGC CTGGAGCGCG GCCCAGGGAT GGGCGGCGAA CCTGCTCAAC ACCGACCCGA ACAAGGCCGC CGAGCACATC GCCGGCCAGC TCGGCGTGCC CCTGGAGCAG GTGCTCACGC AGATCAAGGG CTACGCCTAC TTCGACCGGG CCACGCAGGC CGGCCCCGAC TATCTGGGCG GCCAGCTCGG CGCCGACATC CGCAAGACCG CGGAGTTCCT GCTCCAACAG GGCCAGGTGC AGGGCGTCGG CCCGGCGCAG CACTACACCG ACGGTGTGTA CGGGGAGGCA GTGAAATGA
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Protein sequence | MIRRATGAST GALKAAALVA IGLTLSGCIV ESGRPEQSRS IGGATPCPVA PDPSVTGTVR IGWQEIPNGD LIVKDTGLLN TCLPNVKTVW SKFSSGGDVI QAFGANSLDI GLLGSAPAAK ALSAPLNIDM KVIWIQDRIG AAESLVAKDP AVKTVGDLRG KRIAVPFAST AHYSLLTALD KAGVTDAQVI NLAPDAIRGA WSGGQIDATY IWEPTLSQLK GNPVTDSAKV AEQGAPTFDL EGARGDFVKD NPAFLKAWSA AQGWAANLLN TDPNKAAEHI AGQLGVPLEQ VLTQIKGYAY FDRATQAGPD YLGGQLGADI RKTAEFLLQQ GQVQGVGPAQ HYTDGVYGEA VK
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