| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3073 |
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| Symbol | |
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| ID | 9157244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 3188363 |
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| End bp | 3189964 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | |
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| Product | ABC transporter permease protein |
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| Protein accession | YP_003648004 |
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| Protein GI | 296140761 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00508741 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCGGAG CGAACGCCGC CGCGGCCCCG GCGGCGGGCC TCAATCGCAC CGTCGCGCAG
ATGCAGTGGA CCCTGTACAA ACGGCGCGCC CGAGGCGGCC GGCTGGCACT GAACATCATC
GTCGGAGTCG TCGCCACCCT CGTCGCACTG GGCTTGGTGC TGGGATCCGT GGCGATCGGT
GTCAGCGGCG ACGCTGCGGG CGGTGCGTGG ATGGCCGCCG CGCTCGCCGG GATCGGTGCG
ATGTGGGCCT ACCTGCCCGC GCTGTCGGGA TTCTCCGATA GCACTCTGCA ACCGCGCCAG
TTCACCCTGC TCCCGTTGCG GCCGCGCCCG TTCGCCCGCG CGTTGTTCCT CGCCTCCCTC
ATCGGGATGC CCTTTCCCAT CACCGTTCTC GCCTGCTGCT TGATCGTGGG GTACGCGATC
GGCCGGGCGC CGATCACGCT GCTGGTGGCC CTGCCCGCCG TCCCCCTCAC GGCGCTGCTG
TTCGTGGCCC TGTCCCGGGT CATCTCGCTC GGCCTCTCCC AGGCGATCCG GTCGCGCCGC
GGCCGCGAGC TGGCGATGCT GGCCTTCGTG GTGGTGTTCT GCGTGCTCTA CGCGGGCCAA
TTCATTCTCA ACCAGCGCAT CGGCGAGACC ATCGACAGCG GCGGTCCTCG TGCGGCGTAC
GCGATCCCGT TCGCCTGGGG CATCACTGCG GTCGAGCGGG CCGCTCAGGG CCAGTGGCTG
ATCGCGGTTT GCGCGCTGCT CGCACTTGCG ACGCTGTGCG GTTTACTCCT GCTGGCCTGG
CAGGCGTTGG TGGGCAGGCT CTTCGACGGC CGGGTCGCGC CGCCGACGGC CGAGCGGTCG
GCGCGCAGCC GCACCAACTA TCGACGCCAG GGCTGGCGCG CGAGCCCACG CGGCGCGGTG
ATCGCGCGGG AGCTCTCGGC GTGGCGGGGC GATGTACGGC GCCTGTACCA GCTCCTCCCC
ACCCTGGCCT TCGCCGTGAT GAGTGCGGTG ATGCCGCTGT TTCTGCCGGA CTTCCCGTTC
AACGCCCGCT GGGGCGCCTA CTTCGTCCTG ATGATGGCGA TCATGGGCGC GATGAACCTG
TACGGCTTGG ACGGCAAGAC CTTCTGGCAT CTCGCGATGG TGCCCGCAGC GGCCTCCGCC
GATGTTCGCG GCCGGCAGAT CGCGTGGGCC GCCGTCACGC TGCCGATCGC TGCGGTCTCG
GCGGTGGTGG TGCGGTTGTT CGGCGACGAT CCGTGGGACC GGATCGAGGT GCCGATCGCG
GTGACCGTGG TGATGCTCGG AGTAGGCGCC GGAGCGATGA TCGCAGGCTC GGCCACCGTG
CCGTACCCGG TACCGGATGC GAAGAAGATG ATGTCCTTCT CGACGCGGAA CTCCGCTGGC
GGAGCGGCCA TCGGCTGGAC CTTCGGCGCA CTCGGTGTCC TGGTCCTGAC GACGGTGCCG
TGCGCACTGC TGGCAGCGCT GTTACCGGCG CCCTTCCGCT GGCTCGGTGT GCTGCTCGCC
GTCGTCCTCG GTGCCGTCGG CTGGTGGTGG GGCGGACGAG TCGCGACCCG CCGGCTGGTC
GATCGCCCTG ATCTGATCCA GTACCAGGTG ACTCGCGGCT GA
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| Protein sequence | MTGANAAAAP AAGLNRTVAQ MQWTLYKRRA RGGRLALNII VGVVATLVAL GLVLGSVAIG
VSGDAAGGAW MAAALAGIGA MWAYLPALSG FSDSTLQPRQ FTLLPLRPRP FARALFLASL
IGMPFPITVL ACCLIVGYAI GRAPITLLVA LPAVPLTALL FVALSRVISL GLSQAIRSRR
GRELAMLAFV VVFCVLYAGQ FILNQRIGET IDSGGPRAAY AIPFAWGITA VERAAQGQWL
IAVCALLALA TLCGLLLLAW QALVGRLFDG RVAPPTAERS ARSRTNYRRQ GWRASPRGAV
IARELSAWRG DVRRLYQLLP TLAFAVMSAV MPLFLPDFPF NARWGAYFVL MMAIMGAMNL
YGLDGKTFWH LAMVPAAASA DVRGRQIAWA AVTLPIAAVS AVVVRLFGDD PWDRIEVPIA
VTVVMLGVGA GAMIAGSATV PYPVPDAKKM MSFSTRNSAG GAAIGWTFGA LGVLVLTTVP
CALLAALLPA PFRWLGVLLA VVLGAVGWWW GGRVATRRLV DRPDLIQYQV TRG
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