Gene Tpau_2956 details

Gene Information

• Locus tag: Tpau_2956
• ID: 9157124
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 3064087
• End bp: 3064689
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 70%
• Product: peptidase S16 lon domain protein
• Protein accession: YP_003647891
• Protein GI: 296140648

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.087431
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTCCGC TGGGCGCCGT GCTCCTGCCG GGCGAGGAGT TGCCGTTGCG CGTCTTCGAA 
CCCCGCTACC GGCGGATGGT GGAGCGCTGC CTCGCCACCG ACGGCCGCTT CGGGGTGGTG 
CTGATCGAAC GGGGCAGCGA GGTGGGCGGT GGCGATGTGC GGACCGATGT CGGCACCATC 
GCCCAGATCG ACCGGTACGT GCGCCGGACG GGCGGCGAAT TCACGCTGGT GTGCAAGGGA 
GCAGAACGGA TCGCGGTGCA GCACTGGCTG CCCGACGATC CTTTTCCGCT CGCCGAGGCG 
GCGCCGTGGC CCGACGAGTC ACAGCCCGCC GTCGACCTGA TCCCCCTGCT CGACAAGCGC 
AACGAGATCG AGCGGCTCTC GGCACAACTC ACGCGGCGCC GGGGCGGGAA GCCGCGCTCG 
TGGCCGAAGC TCACGCTGCC CGAGCATCCG GTGGAGCGCA GCTATCTTCT CGCTCGCGCT 
CTCCCGCTGT CCGATGTCGA CCGGTATCGC GCGCTGGCAG CGCCGGGTCC GGCGGATCGC 
GTCCACGTGC TGACCGACGC ACTGGACGAC CTGATCGCCA CCCTGAAGTT CCAGCTGCAG 
TAG 

 

Protein sequence

MFPLGAVLLP GEELPLRVFE PRYRRMVERC LATDGRFGVV LIERGSEVGG GDVRTDVGTI 
AQIDRYVRRT GGEFTLVCKG AERIAVQHWL PDDPFPLAEA APWPDESQPA VDLIPLLDKR 
NEIERLSAQL TRRRGGKPRS WPKLTLPEHP VERSYLLARA LPLSDVDRYR ALAAPGPADR 
VHVLTDALDD LIATLKFQLQ