Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_2894 |
Symbol | |
ID | 9157062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 3002946 |
End bp | 3003602 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003647831 |
Protein GI | 296140588 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCCGCA TCCCTGCCGC CGAGCGTCGC TCAGAGCTCG TCGATGCCGC CGTCCGCGTG ATCGCGATCC ACGGGGTCGA TGGCGCCACG ACCCGCAGGA TCGCGGACGC GGCGAATGCT CCGCTCGCCA CGTTGCACTA CTGCTTCTCC TCGAAAGAGG AGCTGTTCGC CGAGGTGTTT CGGCACGTCG CCGGGCAGTA CCGGGACGTA CTCGCGCGCA ACGACTGCCA CGGCGATGTG AAAGAGACCG CGCGCTCGCT GATGCGCGGG GTGATGCAGT GGTACGTCGC GAATGAAGAC TTCGGACGTG CGATCATCGA GCTGATCAGC TGGGCGCGGC GACAGGCGAA TGAACAGGCC GTCATGGTGT ACACCGAGGC GAATGCCTCG CTCCGGGGCA TTCTGGAGGC CGACGCGGCG GCGGCGGGAC AATCGCCGTC CGACGAGGCG ATCGATGAGC TGGCGTATGT GGTCACGGTC CTCACCGACG GCTTCGCCAT GAACTGGTTG GTATTCGCGG ACCGGGATGC CGCGTCGGCG CACATGGACC TCGCCGTACG CACGCTGGAC GCGTGGATGG ACGCGAACCT GGACCCGGGC GATAGCCGTT CCCCGGCATC CGCGGGAGCG CTCCTGTCGT GGGTTGACGT GGACTGA
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Protein sequence | MARIPAAERR SELVDAAVRV IAIHGVDGAT TRRIADAANA PLATLHYCFS SKEELFAEVF RHVAGQYRDV LARNDCHGDV KETARSLMRG VMQWYVANED FGRAIIELIS WARRQANEQA VMVYTEANAS LRGILEADAA AAGQSPSDEA IDELAYVVTV LTDGFAMNWL VFADRDAASA HMDLAVRTLD AWMDANLDPG DSRSPASAGA LLSWVDVD
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