Gene Tpau_2884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2884 
Symbol 
ID9157052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp2992161 
End bp2994584 
Gene Length2424 bp 
Protein Length807 aa 
Translation table11 
GC content71% 
IMG OID 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_003647821 
Protein GI296140578 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.17736 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATCG ACACGACCCC GGCCGTCGCC GCTGACGACA TCGGCGCCAC CCCTCGCGTA 
CGGACCATCA CGGGCCTGCT CGCCGACGGT GCCGCCCGAA CGCCCGACGC CGAATTGCTC
CGCTTCGGCG ACGAATCCTG GACCTACCGG AGGTTCGACG AGGCGTCGTC GCGGCTCGCG
CACCGGCTCA TCGAGACCGA CGGCATCGCT CCCGGCGACC GCGTGGCGAT CATGCTGCCC
AACATCGCGG GTTGGCCGCT CACCTGGCTG GCAGCGCTGA AGGCAGGCGC GGTCGCGGTG
CCCGTCAACT CCGCCTACCG CGCGGCGGAT CTGCAGTTCG TGCTCACCGA TTCCGGCGCC
CGGGTGATCG TGACCGATGG CGATCACCTC CCGCTGGTGC GCGAGGTCAT CTCCGGCGAT
CCTGCCCTCG CCGGCGTCGC CGTGCTGGAC ATCGCGGAGA CGGCCGACGC GGCGTTCCCC
GCGACCGCAC CGGAGGTCTC CGTCGGACCC GAGACGCTCG CGAACCTGCA GTACACATCG
GGCACCACGG GATTCCCGAA GGCGTGCATG CTGACCCACG ACTACTGGAC CCGGATCGGT
TGGGTGTGTG CGGGATCCGT CGGGCTGGGG CCGGACGACG TGCTGCTCAC CGCGCAGCCC
TTCTCGTACA TGGATCCGCA GTGGAACACC GTCCTGGCCC TGACCACCGG GGCACCGCTC
GTGGTGCTGC CGCGCTTCTC GGCATCGGGA TTCATGGCCG ACGTGCGCAG CCACGGTGCC
ACCTTCTGCT ACGTCCTCGG CTCCATGCCG ACGCTGCTGT TCAAGCAGCC GCCCGGCCCC
GAGGATCGGG ACAACCGCCT GCGCGCGGTG TTCTGCTCCG CGATTCCCCA GGCCCTGCAC
GCCGACCTCG AGGAACGCTG GGGTGCGCCC TGGCGTGAGG TCTACGGGAT GACGGAGAGC
GGGATGGACC TCTACAGCCC GTTCCACGAC GTCGACGCCG TCGGCAGCGG CACGCTCGGA
CACCCCGTGC CCACCAAGCA GATCCGGATC GTGGATGCCG ATGGCACCGA GGTGGCCGCC
GGCACGCCGG GTGAGCTCAC GGTGTCCGGG GCCCCGATGA TGCTGGGCTA CTGGAACCGG
CCCGAGGCCA CCGCCGAGAC GATCCGCGAC GGCTGGCTGC ACACCGGCGA CCTCGCCGTG
GTCGACGAGC ACGGCGGCAT CCGTCTCGTG GGCCGACTCA AGGACATGGT GCGGCGCGGC
GGCGAGAACG TCGCGGCCGT CGAGGTCGAG GCCGCCCTCG AACACGACGA TGCCGTTGTC
GCGTCTGCCG TTGTCGCCGA ACCCGACCCG GTGCTCGGTG AGGAGGTCAA GGCGTTCGTC
CAACTGGGCC CGGGGATCGC CGCCGAGCGC GCGACGGCCG CGGCGATCGT CGCGCGCGTG
GCCCAGCGGC TCGCGAAGTT CAAGGTGCCG CGCTACATCG AGTTCGTCAC CGACTTCCCG
CGCACCCCGT CCCAGCGGGT CGCGAAACCC ACCCTCAAGG CCCGTGCCGC CGAGGTGCCC
GGCACGGTCT TCGACCTGCG CGCTTCGTCG AGCATCCCGG CACCGTCGAA CAAGGAGAAT
CCCGTGGAGC ACAACAACGA TCCCACCGAG CAGGTGCTCG TGGAGATGGT GCGCGAGGTC
GCCGTCATCA CGCTGCGCCG CCCCGACAAG CTCAACGCCC TGACGGTGGG CATGCGCCGC
CGCCTCGCCG CCCTCATCCG CGAGTACGGC ACCGGCGAGC TCGCCCGCGG TATCGTACTC
ACCGGTACCG GGCGCGCCTT CAGCGCCGGC GAAGACCTCT CCGCGCCGCC GACAGATTTC
GACGGTATGC GGGACAGCTT CGAGAGTTTC CACGATGTGA CCCGCGCCGT GATCGAGACC
CGCGTGCCCG TCATCGCCGC GGTCAACGGG ATCGCGGTCG GCGGCGCGTC GGAGATCACG
TTGTGCTGCG ACGCCCGGAT CGGCGCCCAC GAGGCGCGGT ACTACCAGCC GGAAAACTCG
CGCGGACTCA CCATCTCGAA CGCGTCGAGC CTCCTGCTCA CCCGGATCGT CCGCGGCCAC
GCCATGCGGA TGATCCTGGG GTCCGAGAAG ATCGGCGCCG AGGAGGCGCT GCGGATCGGG
CTGCTCGACG AGGTCGTGGA GCAGTCCGCG CTCGTGGACC GCGCGGTCGA GACGATCCAT
GCGTGGACCC CGGAGGGCGC GAACACCACG GCCCTGCACC TGGGGCTGTT GCGGCCGACA
GTCGACGAGA TCGAGCGCGC CTTCGCCCGC GAGGACGCCG CGGCGGACGA GGCGTGGAAC
AGCGGCGCCC TGACCGCCGG CGTTCAGAGC TTCTGGGACG CCCGCACCAC ACCCGCCACC
GCCACCACCG GAGGAACCCG ATGA
 
Protein sequence
MTIDTTPAVA ADDIGATPRV RTITGLLADG AARTPDAELL RFGDESWTYR RFDEASSRLA 
HRLIETDGIA PGDRVAIMLP NIAGWPLTWL AALKAGAVAV PVNSAYRAAD LQFVLTDSGA
RVIVTDGDHL PLVREVISGD PALAGVAVLD IAETADAAFP ATAPEVSVGP ETLANLQYTS
GTTGFPKACM LTHDYWTRIG WVCAGSVGLG PDDVLLTAQP FSYMDPQWNT VLALTTGAPL
VVLPRFSASG FMADVRSHGA TFCYVLGSMP TLLFKQPPGP EDRDNRLRAV FCSAIPQALH
ADLEERWGAP WREVYGMTES GMDLYSPFHD VDAVGSGTLG HPVPTKQIRI VDADGTEVAA
GTPGELTVSG APMMLGYWNR PEATAETIRD GWLHTGDLAV VDEHGGIRLV GRLKDMVRRG
GENVAAVEVE AALEHDDAVV ASAVVAEPDP VLGEEVKAFV QLGPGIAAER ATAAAIVARV
AQRLAKFKVP RYIEFVTDFP RTPSQRVAKP TLKARAAEVP GTVFDLRASS SIPAPSNKEN
PVEHNNDPTE QVLVEMVREV AVITLRRPDK LNALTVGMRR RLAALIREYG TGELARGIVL
TGTGRAFSAG EDLSAPPTDF DGMRDSFESF HDVTRAVIET RVPVIAAVNG IAVGGASEIT
LCCDARIGAH EARYYQPENS RGLTISNASS LLLTRIVRGH AMRMILGSEK IGAEEALRIG
LLDEVVEQSA LVDRAVETIH AWTPEGANTT ALHLGLLRPT VDEIERAFAR EDAAADEAWN
SGALTAGVQS FWDARTTPAT ATTGGTR