Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_2884 |
Symbol | |
ID | 9157052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 2992161 |
End bp | 2994584 |
Gene Length | 2424 bp |
Protein Length | 807 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_003647821 |
Protein GI | 296140578 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.17736 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCATCG ACACGACCCC GGCCGTCGCC GCTGACGACA TCGGCGCCAC CCCTCGCGTA CGGACCATCA CGGGCCTGCT CGCCGACGGT GCCGCCCGAA CGCCCGACGC CGAATTGCTC CGCTTCGGCG ACGAATCCTG GACCTACCGG AGGTTCGACG AGGCGTCGTC GCGGCTCGCG CACCGGCTCA TCGAGACCGA CGGCATCGCT CCCGGCGACC GCGTGGCGAT CATGCTGCCC AACATCGCGG GTTGGCCGCT CACCTGGCTG GCAGCGCTGA AGGCAGGCGC GGTCGCGGTG CCCGTCAACT CCGCCTACCG CGCGGCGGAT CTGCAGTTCG TGCTCACCGA TTCCGGCGCC CGGGTGATCG TGACCGATGG CGATCACCTC CCGCTGGTGC GCGAGGTCAT CTCCGGCGAT CCTGCCCTCG CCGGCGTCGC CGTGCTGGAC ATCGCGGAGA CGGCCGACGC GGCGTTCCCC GCGACCGCAC CGGAGGTCTC CGTCGGACCC GAGACGCTCG CGAACCTGCA GTACACATCG GGCACCACGG GATTCCCGAA GGCGTGCATG CTGACCCACG ACTACTGGAC CCGGATCGGT TGGGTGTGTG CGGGATCCGT CGGGCTGGGG CCGGACGACG TGCTGCTCAC CGCGCAGCCC TTCTCGTACA TGGATCCGCA GTGGAACACC GTCCTGGCCC TGACCACCGG GGCACCGCTC GTGGTGCTGC CGCGCTTCTC GGCATCGGGA TTCATGGCCG ACGTGCGCAG CCACGGTGCC ACCTTCTGCT ACGTCCTCGG CTCCATGCCG ACGCTGCTGT TCAAGCAGCC GCCCGGCCCC GAGGATCGGG ACAACCGCCT GCGCGCGGTG TTCTGCTCCG CGATTCCCCA GGCCCTGCAC GCCGACCTCG AGGAACGCTG GGGTGCGCCC TGGCGTGAGG TCTACGGGAT GACGGAGAGC GGGATGGACC TCTACAGCCC GTTCCACGAC GTCGACGCCG TCGGCAGCGG CACGCTCGGA CACCCCGTGC CCACCAAGCA GATCCGGATC GTGGATGCCG ATGGCACCGA GGTGGCCGCC GGCACGCCGG GTGAGCTCAC GGTGTCCGGG GCCCCGATGA TGCTGGGCTA CTGGAACCGG CCCGAGGCCA CCGCCGAGAC GATCCGCGAC GGCTGGCTGC ACACCGGCGA CCTCGCCGTG GTCGACGAGC ACGGCGGCAT CCGTCTCGTG GGCCGACTCA AGGACATGGT GCGGCGCGGC GGCGAGAACG TCGCGGCCGT CGAGGTCGAG GCCGCCCTCG AACACGACGA TGCCGTTGTC GCGTCTGCCG TTGTCGCCGA ACCCGACCCG GTGCTCGGTG AGGAGGTCAA GGCGTTCGTC CAACTGGGCC CGGGGATCGC CGCCGAGCGC GCGACGGCCG CGGCGATCGT CGCGCGCGTG GCCCAGCGGC TCGCGAAGTT CAAGGTGCCG CGCTACATCG AGTTCGTCAC CGACTTCCCG CGCACCCCGT CCCAGCGGGT CGCGAAACCC ACCCTCAAGG CCCGTGCCGC CGAGGTGCCC GGCACGGTCT TCGACCTGCG CGCTTCGTCG AGCATCCCGG CACCGTCGAA CAAGGAGAAT CCCGTGGAGC ACAACAACGA TCCCACCGAG CAGGTGCTCG TGGAGATGGT GCGCGAGGTC GCCGTCATCA CGCTGCGCCG CCCCGACAAG CTCAACGCCC TGACGGTGGG CATGCGCCGC CGCCTCGCCG CCCTCATCCG CGAGTACGGC ACCGGCGAGC TCGCCCGCGG TATCGTACTC ACCGGTACCG GGCGCGCCTT CAGCGCCGGC GAAGACCTCT CCGCGCCGCC GACAGATTTC GACGGTATGC GGGACAGCTT CGAGAGTTTC CACGATGTGA CCCGCGCCGT GATCGAGACC CGCGTGCCCG TCATCGCCGC GGTCAACGGG ATCGCGGTCG GCGGCGCGTC GGAGATCACG TTGTGCTGCG ACGCCCGGAT CGGCGCCCAC GAGGCGCGGT ACTACCAGCC GGAAAACTCG CGCGGACTCA CCATCTCGAA CGCGTCGAGC CTCCTGCTCA CCCGGATCGT CCGCGGCCAC GCCATGCGGA TGATCCTGGG GTCCGAGAAG ATCGGCGCCG AGGAGGCGCT GCGGATCGGG CTGCTCGACG AGGTCGTGGA GCAGTCCGCG CTCGTGGACC GCGCGGTCGA GACGATCCAT GCGTGGACCC CGGAGGGCGC GAACACCACG GCCCTGCACC TGGGGCTGTT GCGGCCGACA GTCGACGAGA TCGAGCGCGC CTTCGCCCGC GAGGACGCCG CGGCGGACGA GGCGTGGAAC AGCGGCGCCC TGACCGCCGG CGTTCAGAGC TTCTGGGACG CCCGCACCAC ACCCGCCACC GCCACCACCG GAGGAACCCG ATGA
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Protein sequence | MTIDTTPAVA ADDIGATPRV RTITGLLADG AARTPDAELL RFGDESWTYR RFDEASSRLA HRLIETDGIA PGDRVAIMLP NIAGWPLTWL AALKAGAVAV PVNSAYRAAD LQFVLTDSGA RVIVTDGDHL PLVREVISGD PALAGVAVLD IAETADAAFP ATAPEVSVGP ETLANLQYTS GTTGFPKACM LTHDYWTRIG WVCAGSVGLG PDDVLLTAQP FSYMDPQWNT VLALTTGAPL VVLPRFSASG FMADVRSHGA TFCYVLGSMP TLLFKQPPGP EDRDNRLRAV FCSAIPQALH ADLEERWGAP WREVYGMTES GMDLYSPFHD VDAVGSGTLG HPVPTKQIRI VDADGTEVAA GTPGELTVSG APMMLGYWNR PEATAETIRD GWLHTGDLAV VDEHGGIRLV GRLKDMVRRG GENVAAVEVE AALEHDDAVV ASAVVAEPDP VLGEEVKAFV QLGPGIAAER ATAAAIVARV AQRLAKFKVP RYIEFVTDFP RTPSQRVAKP TLKARAAEVP GTVFDLRASS SIPAPSNKEN PVEHNNDPTE QVLVEMVREV AVITLRRPDK LNALTVGMRR RLAALIREYG TGELARGIVL TGTGRAFSAG EDLSAPPTDF DGMRDSFESF HDVTRAVIET RVPVIAAVNG IAVGGASEIT LCCDARIGAH EARYYQPENS RGLTISNASS LLLTRIVRGH AMRMILGSEK IGAEEALRIG LLDEVVEQSA LVDRAVETIH AWTPEGANTT ALHLGLLRPT VDEIERAFAR EDAAADEAWN SGALTAGVQS FWDARTTPAT ATTGGTR
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